Learn more about Bioinformatics Toolbox

getrelatives (biograph) - Find relatives in biograph object

Syntax

Nodes = getrelatives(BiographNode)
Nodes = getrelatives(BiographNode,NumGenerations)

Arguments

BiographNode	Node in a biograph object.
NumGenerations	Number of generations. Enter a positive integer.

Description

Nodes = getrelatives(BiographNode) finds all the direct relatives for a given node (BiographNode).

Nodes = getrelatives(BiographNode,NumGenerations) finds the direct relatives for a given node (BiographNode) up to a specified number of generations (NumGenerations).

Examples

1. Create a biograph object.

   cm = [0 1 1 0 0;1 0 0 1 1;1 0 0 0 0;0 0 0 0 1;1 0 1 0 0];
   bg = biograph(cm)
   

2. Find all nodes interacting with node 1.

   intNodes = getrelatives(bg.nodes(1));
   set(intNodes,'Color',[.7 .7 1]);
   bg.view;

See Also

Bioinformatics Toolbox function: biograph (object constructor)

Bioinformatics Toolbox object: biograph object

Bioinformatics Toolbox methods of a biograph object: dolayout, get, getancestors, getdescendants, getedgesbynodeid, getnodesbyid, getrelatives, set, view

getpdb

getrelatives (geneont)

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