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sbiodesktop - Open SimBiology modeling and simulation GUI

Syntax

sbiodesktop sbiodesktop(modelObj)

Arguments

modelObj Model object or an array of model objects. Enter the variable name for a top-level SimBiology model object. If you enter an array of model objects, the SimBiology desktop opens with each model object in a separate model session.

Description

sbiodesktop opens the SimBiology desktop, which lets you do the following:

Build a SimBiology model by representing reaction pathways and entering kinetic data for the reactions.
Import or export SimBiology models to and from the MATLAB workspace or from a Systems Biology Markup Language (SBML) file.
Modify an existing SimBiology model.
Simulate a SimBiology model through individual or ensemble runs.
View results from the simulation.
Perform analysis tasks such as sensitivity analysis, parameter and species scans, and calculate conserved moieties.
Create and/or modify user-defined units and unit prefixes.
Create and/or modify user-defined kinetic laws.

sbiodesktop(modelObj) opens the SimBiology desktop with a top-level SimBiology model object (modelObj). If there is a project open in the SimBiology desktop, this command adds the model (modelObj) to the project. A top-level SimBiology model object has its property Parent set to the SimBiology root object. Thus, querying sbioroot at the command line shows you all models in the MATLAB workspace, including the models available in the desktop. Any changes you make to the model at the command line are reflected in the desktop because both are pointing to the same model object in the Root object.

Note The sbioreset command removes all models from the root object and therefore this command also removes all models from the SimBiology desktop.

Examples

Create a SimBiology model in the MATLAB workspace, and then open the GUI with the model.

modelObj = sbiomodel('cell');
sbiodesktop(modelObj)

sbiodesktop - Open SimBiology modeling and simulation GUI

Syntax

Arguments

Description

Examples

See Also

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