| Version 2.1 (R2006b+) SimBiology® Software Release Notes | ![]() |
This table summarizes what's new in Version 2.1 (R2006b+):
| New Features and Changes | Version Compatibility Considerations | Fixed Bugs and Known Problems | Related Documentation at Web Site |
|---|---|---|---|
| Yes Details below | Yes—Details labeled as Compatibility Considerations, below. See also Summary. | Bug
Reports Includes fixes | No |
New features and changes introduced in this version are:
You can annotate and print your pathway's block diagram in SimBiology, or export the diagram using .svg, .jpeg, or .pdf file formats. For example, you can annotate the diagram with the name of the author, the date, notes, and name of the organization. You can choose to place this content as a header or footer on the diagram page.
The SimBiology desktop supports multiple diagram features and actions through the Diagram menu. Use the menu options to do the following:
Copy, paste, and delete blocks.
Select model or diagram components by category (for example, select all lines or all Species blocks).
Filter selected portions of a model diagram to include only model or diagram components by category.
Edit multiple blocks or lines.
Add selected blocks to a Block Library.
Annotate and print, or export your model diagram.
Perform layout tasks, for example, hide and show blocks, move blocks to the front or back of a diagram, rotate a block, and pin or unpin selected blocks.
Copy the style of a block and apply the style to a group of selected blocks.
Reload a graphic used for a block in the Block Properties dialog box.
Access diagram tools such as the Diagram Table View, Block Library Browser, Diagram Overview, and Block Overview.
There is a compatibility consideration regarding the support for editing multiple blocks or lines. In SimBiology Versions 2.0 and 2.0.1, if you selected multiple blocks and/or lines and applied an editing action such as Hide, Pin, or Hide Name, the action applied only to the block on which you selected the right-click (context) menu. Starting in Version 2.1, applicable editing actions are propagated to all selected blocks.
The Block Overview tool provides a summary of key information about a particular block. Hover the mouse over a block to find information in the Block Overview pane. Each block includes information pertinent to that type of block, for example, a species block overview shows Name, InitialAmount, InitialAmountUnits, the number and list of reactions the species is involved in, and a description of any indicators shown in the diagram.
The enhancements for the SimBiologydesktop let you do the following:
Set your preference to open a SimBiology pane with a single-click in the Project Explorer. Select File > Preferences to open the Preferences dialog box.
Interrupt and stop model verification by clicking Stop when Verify is running.
Sort the available plot arguments in the Simulation and Data panes. The X and Y argument lists are now tabulated.
View a species and any of its cloned blocks from the search results for the species.
Select and view multiple results for Find and Bookmarks in either the diagram or the table form.
![]() | Version 2.1.1 (R2007a) SimBiology Software | Version 2.0.1 (R2006b) SimBiology Software | ![]() |
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