Open NGS Browser to visualize and explore alignments
ngsbrowser opens the NGS Browser app.
the BioMap object
bmObj and opens it in the NGS
Create a BioMap object from a SAM-formatted file.
b = BioMap('ex1.sam');
Display the object in the NGS Browser.
Use the NGS Browser to compare the alignment of multiple data sets to a common reference sequence.
Use the NGS Browser to investigate regions of interest in the short-read alignment determined by various analyses, such as RNA-Seq, ChIP-Seq, and genetic variation analyses.