Documentation

This is machine translation

Translated by Microsoft
Mouseover text to see original. Click the button below to return to the English verison of the page.

Note: This page has been translated by MathWorks. Please click here
To view all translated materals including this page, select Japan from the country navigator on the bottom of this page.

sbiovariant

Construct variant object

Syntax

variantObj = sbiovariant(vName)
variantObj = sbiovariant(vName,vContent)
variantObj = sbiovariant(___,Name,Value)

Description

example

variantObj = sbiovariant(vName) creates a variant object named vName.

example

variantObj = sbiovariant(vName,vContent) creates a variant object and sets its Content property to the cell array of data, vContent.

example

variantObj = sbiovariant(___,Name,Value) uses any of the input arguments in the previous syntaxes and additional options specified by one or more Name,Value pair arguments. Each name-value pair represents a property and corresponding value of a variant object. To view all the properties for a variant object, use the get function.

To append more data to an existing content of a variant, use addcontent. To replace existing data in the Content property, use the set function or dot notation.

Examples

collapse all

Load the G protein model.

sbioloadproject gprotein

The model already has a variant for a mutant strain.

getvariant(m1)
   SimBiology Variant - mutant (inactive)

   ContentIndex:     Type:        Name:             Property:           Value:
   1                 parameter    kGd               Value               0.004

Create another variant with the kGd value of 0.5, and initial amount of 5000 for the G species.

v2 = sbiovariant('v2');
v2.Content = {{'parameter','kGd','Value',0.5},...
              {'species','G','InitialAmount',5000}}
   SimBiology Variant - v2 (inactive)

   ContentIndex:     Type:        Name:             Property:           Value:
   1                 parameter    kGd               Value               0.5
   2                 species      G                 InitialAmount       5000

Simulate the model using the initial conditions specified in v2.

sbioplot(sbiosimulate(m1,v2));

Simulate the wild-type (original) model to compare.

sbioplot(sbiosimulate(m1));

Input Arguments

collapse all

Name of a variant object, specified as a character vector.

Example: 'cancerPatient'

Variant content, specified as a cell array or cell array of cell arrays. Each cell array must have four values in this order: the type of model element, its name, its property name, and the alternate value of the property. For instance, {'species','A','InitialAmount',5} specifies to store an alternate initial amount of 5 for the species A.

Example: {'parameter','ka','Value',0.3}

Output Arguments

collapse all

Variant with alternate model values, specified as a variant object.

Introduced in R2008a

Was this topic helpful?