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sbmlimport

Import SBML-formatted file

Syntax

modelObj = sbmlimport(File)

Description

modelObj = sbmlimport(File) imports File, a Systems Biology Markup Language (SBML)-formatted file, into MATLAB and creates a model object modelObj.

File is a character vector specifying a file name or a path and file name supported by your operating system. File extensions are .sbml or .xml.File can also be a URL, if you have the Java® programming language.

sbmlimport supports SBML Level 3 Version 1 and earlier.

For functional characteristics and limitations, see SBML Support.

Input Arguments

File

Character vector specifying either of the following:

  • File name or path and file name supported by your operating system

  • URL (if you have Java programming language)

Examples

Import SBML model:

sbmlobj = sbmlimport('oscillator.xml');

References

Finney, A., Hucka, M., (2003). Systems Biology Markup Language (SBML) Level 2: Structures and facilities for model definitions. SBML.org.

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