User's Guide (Bioinformatics Toolbox™)

User's Guide

Overview of the functions and features in Bioinformatics Toolbox

Gene expression and transcription factor analysis of next-generation sequencing data, including RNA-Seq and ChIP-Seq

Examples for determining nucleotide content with sequence statistics, and using the pairwise alignment functions to locate corresponding sequences in other organisms.

Microarray Analysis

Examples that analyze and visualize gene expression patterns.

Phylogenetic Analysis

Example for creating phylogenetic tree data and visualizing the data in a tree structure. Reference for the phylogenetic tree graphical interface.

Getting Started

Free Computational Biology Interactive Kit

See how to analyze, visualize, and model biological data and systems using MathWorks products.

Get free kit

Trials Available

Try the latest computational biology products.

Get trial software

Search MATLAB Documentation
R2012a Documentation → Bioinformatics Toolbox
View documentation for other releases	Learn more about Bioinformatics Toolbox

Getting Started	Overview of the functions and features in Bioinformatics Toolbox
High-Throughput Sequence Analysis	Gene expression and transcription factor analysis of next-generation sequencing data, including RNA-Seq and ChIP-Seq
Sequence Analysis	Examples for determining nucleotide content with sequence statistics, and using the pairwise alignment functions to locate corresponding sequences in other organisms.
Microarray Analysis	Examples that analyze and visualize gene expression patterns.
Phylogenetic Analysis	Example for creating phylogenetic tree data and visualizing the data in a tree structure. Reference for the phylogenetic tree graphical interface.