Outputs - Specify species and parameter outputs for sensitivity analysis

Description

Outputs is a property of the SensitivityAnalysisOptions object. SenstivityAnalysisOptions is a property of the configuration set object.

Use Outputs to specify the species and parameters for which you want to compute sensitivities.

The SimBiology software calculates sensitivities with respect to the values of the parameters and the initial amounts of the species specified in the Inputs property. When you simulate a model with SensitivityAnalysis enabled in the active configuration set object, sensitivity analysis returns the computed sensitivities of the species and parameters specified in Outputs. For a description of the output, see the SensitivityAnalysisOptions property description.

Characteristics

Applies to	Object: SensitivityAnalysisOptions
Data type	Species or parameter object or array of objects Note   If a species or parameter object is determined by a repeated assignment rule, then you cannot use it as an Outputs property.
Data values	Species or parameter object, or an array of objects. Default is [] (empty array).
Access	Read/write

Examples

This example shows how to set Outputs for sensitivity analysis.

1. Import the radio decay model from the SimBiology demos.

   modelObj  = sbmlimport('radiodecay');

2. Retrieve the configuration set object from modelObj.

   configsetObj = getconfigset(modelObj);

3. Add a species to the Outputs property and display it. Use the sbioselect function to retrieve the species object from the model.

   speciesObj = sbioselect(modelObj, 'Type', 'species', 'Name', 'z');
   set(configsetObj.SensitivityAnalysisOptions,'Outputs', speciesObj);
   get(configsetObj.SensitivityAnalysisOptions, 'Outputs')

   SimBiology Species Array
   
   Index:  Compartment:  Name:  InitialAmount: InitialAmountUnits:
     1       unnamed      z        0              molecule

See Also

Inputs, sbioselect, SensitivityAnalysis, SensitivityAnalysisOptions

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