Hi! I'm constructing a script to basically find all promoter sequences in a bacterial genome. Problem is, I can't manage to split up the 5 million base nucleotide genome sequence into manageable segments so I can run seqshoworf command (it only works with max 1 million nucleotides).
here's the code i have so far:
putida = getgenbank('NC_009512.1','SequenceOnly',true); putida1 = putida(1:100000); putida2 = putida(100001:200000); putida3 = putida(200001:300000); %etc
for i=1:1:60 putida'num2str(i)' = putida(100000*i-99999:100000*i); end
Could someone correct the for loop so that I can work separately with each putida(n) segment?