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Web Deployment Using MATLAB Builder For .NET

by Todd Flanagan

 

14 Mar 2006 (Updated 14 Mar 2006)

Code covered by BSD License  

A web-based gene analysis demonstration using MATLAB Builder for .NET

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File Information
Description

This is a implementation of the same web application listed as "inspired by". This implementation uses .NET assemblies in lieu of COM components and demonstrates some of the implementation detail differences between the two.

MATLAB Builder for .NET enables you to deploy MATLAB algorithms as .NET Assemblies, which can be used on any web server on a Microsoft operating system. The MATLAB based Assembly will handle your technical computing, while integrating with a front-end web application built using industry-standard web development tools.

The example in this package is a Bioinformatics application (Analysis of Gene Expression From a Microarray.) The package includes the m-code for the Assembly, as well as the ASP.NET/C# code for the web pages. The bioinformatics toolbox is required to build the Assembly , but the pre-built Assembly included in the package can be deployed to any machine with the MCR (MATLAB Component Runtime.)

Acknowledgements

The author wishes to acknowledge the following in the creation of this submission:
Web Deployment Using MATLAB

Required Products Bioinformatics Toolbox
MATLAB Builder NE
MATLAB Compiler
MATLAB release MATLAB 7.2 (R2006a)
Other requirements Microsoft Visual Studio v 7.1 Microsoft.NET Framework Microsoft Internet Information Services 5.1
Zip File Content  
Other Files
Gene_Expression_Dot_Net/AnalyzeData.aspx,
Gene_Expression_Dot_Net/AnalyzeData.aspx.cs,
Gene_Expression_Dot_Net/AnalyzeData.aspx.resx,
Gene_Expression_Dot_Net/AnalyzerProxy.cs,
Gene_Expression_Dot_Net/AssemblyInfo.cs,
Gene_Expression_Dot_Net/bin/Gene_Expression_Dot_Net.dll,
Gene_Expression_Dot_Net/bin/Gene_Expression_Dot_Net.pdb,
Gene_Expression_Dot_Net/bin/geneAnalysisDotNet/geneAnalysisDotNet.ctf,
Gene_Expression_Dot_Net/bin/geneAnalysisDotNet/geneAnalysisDotNet.dll,
Gene_Expression_Dot_Net/bin/geneAnalysisDotNet/geneAnalysisDotNet.xml,
Gene_Expression_Dot_Net/Clustering.aspx,
Gene_Expression_Dot_Net/Clustering.aspx.cs,
Gene_Expression_Dot_Net/Clustering.aspx.resx,
Gene_Expression_Dot_Net/data/data.xls,
Gene_Expression_Dot_Net/data/data1.xls,
Gene_Expression_Dot_Net/data_sources.xml,
Gene_Expression_Dot_Net/Gene_Expression_Dot_Net.csproj,
Gene_Expression_Dot_Net/Gene_Expression_Dot_Net.csproj.webinfo,
Gene_Expression_Dot_Net/Gene_Expression_Dot_Net.sln,
Gene_Expression_Dot_Net/Gene_Expression_Dot_Net.suo,
Gene_Expression_Dot_Net/GeneratePlot.aspx,
Gene_Expression_Dot_Net/GeneratePlot.aspx.cs,
Gene_Expression_Dot_Net/GeneratePlot.aspx.resx,
Gene_Expression_Dot_Net/getGeneClustering.mat,
Gene_Expression_Dot_Net/Global.asax,
Gene_Expression_Dot_Net/Global.asax.cs,
Gene_Expression_Dot_Net/Global.asax.resx,
Gene_Expression_Dot_Net/html.zip,
Gene_Expression_Dot_Net/images/header_bg.jpg,
Gene_Expression_Dot_Net/images/microarray.bmp,
Gene_Expression_Dot_Net/msrc/applyLogRatio.m,
Gene_Expression_Dot_Net/msrc/applyThreshold.m,
Gene_Expression_Dot_Net/msrc/build.log,
Gene_Expression_Dot_Net/msrc/distrib/_install.bat,
Gene_Expression_Dot_Net/msrc/distrib/geneAnalysisDotNet.ctf,
Gene_Expression_Dot_Net/msrc/distrib/geneAnalysisDotNet.dll,
Gene_Expression_Dot_Net/msrc/distrib/geneAnalysisDotNet.xml,
Gene_Expression_Dot_Net/msrc/filterGenes.m,
Gene_Expression_Dot_Net/msrc/geneAnalysisDotNet.nbl,
Gene_Expression_Dot_Net/msrc/getBitMap.m,
Gene_Expression_Dot_Net/msrc/getGeneClustering.m,
Gene_Expression_Dot_Net/msrc/getKMean.m,
Gene_Expression_Dot_Net/msrc/getKMeanCentroids.m,
Gene_Expression_Dot_Net/msrc/getProfilePlot.m,
Gene_Expression_Dot_Net/msrc/getSampleClustering.m,
Gene_Expression_Dot_Net/msrc/getScatterPlot.m,
Gene_Expression_Dot_Net/msrc/getStatisticsPlot.m,
Gene_Expression_Dot_Net/msrc/initComponent.m,
Gene_Expression_Dot_Net/msrc/normalizeData.m,
Gene_Expression_Dot_Net/msrc/src/geneAnalysisDotNet_mcc_component_data.cs,
Gene_Expression_Dot_Net/msrc/src/geneAnalysisDotNetclass.cs,
Gene_Expression_Dot_Net/msrc/src/mccExcludedFiles.log,
Gene_Expression_Dot_Net/msrc/testHarness.m,
Gene_Expression_Dot_Net/msrc/transform.m,
Gene_Expression_Dot_Net/Start.aspx,
Gene_Expression_Dot_Net/Start.aspx.cs,
Gene_Expression_Dot_Net/Start.aspx.resx,
Gene_Expression_Dot_Net/styles.css,
Gene_Expression_Dot_Net/Web.config,
Gene_Expression_Dot_Net/Webinar Example.doc,
license.txt
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Comments and Ratings (6)
13 Apr 2006 Madalina M

Very well built and documented.

02 May 2006 john reynders

test

20 Nov 2006 fekadu mihret

That is so great mathlab progra
mming

20 Nov 2006 Felix Alonso Gomollon  
22 Nov 2006 ralu ralu  
13 Dec 2006 Wilson Barrera  
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Tag Activity for this File
Tag Applied By Date/Time
biotech Todd Flanagan 22 Oct 2008 08:18:23
pharmaceutical Todd Flanagan 22 Oct 2008 08:18:23
webinar Todd Flanagan 22 Oct 2008 08:18:23
net Todd Flanagan 22 Oct 2008 08:18:23
web deployment Todd Flanagan 22 Oct 2008 08:18:24
webbased Todd Flanagan 22 Oct 2008 08:18:24
gene analysis Todd Flanagan 22 Oct 2008 08:18:24
 

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