Accessing Mass spectrometry data using the Proteome Commons IO Library

Shows how to load many types of mass spectrometry data.

Description

There are many formats for mass spectrometry data. The Proteome Commons Project http://www.proteomecommons.org provides a library of functions for reading many of the widely used formats. By using the MATLAB-Java interface you can leverage the functions in the Proteome Commons IO library to allow you to read almost any mass spectrometry data file.

• MATLAB release: MATLAB 7.2 (R2006a)

[Jayson Falkner]

This is great to see. I like working with mass spec data, and I'm thrilled to see this work incorporated with Matlab.

[Hosein]

Hi Robert
The link you provided for downloading
"ProteomeCommons.org-IO-T2D.jar"
is no more working. Can you let me know the new address, or send me the jar files, to [e-mail]

thanks a lot

[Rafael]

Is there a way to i open .baf file into matlab?