| Description |
In biology, graph formalism is prevalently used. This graph package is for you to analysis biomolecular interaction network with the comfort of MATLAB. The package includes algorithm like modularity, clustering coefficient, all-pair shortest path (amazingly fast, great if you have 64-bit) and so on. It also do plotting the graph with force directed layout. The graph can be generated from various input format as well as SBML , GML, DOT or SIF file.
The package is written as MATLAB object and furnish with rich tools for manipulating the graph object and export adjacency matrix for further analysis. |
| Other Files |
@graph/adjacency.m, @graph/allspath.m, @graph/assortativity.m, @graph/bfs.m, @graph/clusteringcoef.m, @graph/components.m, @graph/Contents.m, @graph/degree.m, @graph/directed.m, @graph/display.m, @graph/dkernel.m, @graph/edges.m, @graph/export.m, @graph/gaPart.asv, @graph/gaPart.m, @graph/get.m, @graph/graph.asv, @graph/graph.m, @graph/hierarchy.m, @graph/laplacian.m, @graph/layout.m, @graph/modmat.m, @graph/modularity.m, @graph/modularity2.m, @graph/neighbors.m, @graph/node.m, @graph/nodeMouseDownFcn.m, @graph/plot.m, @graph/remove.m, @graph/reset.m, @graph/set.m, @graph/shortestPath.m, @graph/simple.m, @graph/size.m, @graph/span.m, @graph/specBiPart.m, @graph/specPart.m, @graph/tracePathInTree.m, @graph/union.m, @graph/verdegdb.m, license.txt
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