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minimum-redundancy maximum-relevance feature selection

by Hanchuan Peng

 

08 May 2007 (Updated 09 May 2007)

The source codes of minimum redundancy feature selection

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Description

Two source code files of the mRMR (minimum-redundancy maximum-relevancy) feature selection method in (Peng et al, 2005 and Ding & Peng, 2005, 2003), whose better performance over the conventional top-ranking method has been demonstrated on a number of data sets in recent publications. This version uses mutual information as a proxy for computing relevance and redundancy among variables (features). Other variations such as using correlation or F-test or distances can be easily implemented within this framework, too.

Hanchuan Peng, Fuhui Long, and Chris Ding, "Feature selection based on mutual information: criteria of max-dependency, max-relevance, and min-redundancy,"
IEEE Transactions on Pattern Analysis and Machine Intelligence,
Vol. 27, No. 8, pp.1226-1238, 2005.

Ding C., and Peng HC, "Minimum redundancy feature selection from microarray gene expression data," Journal of Bioinformatics and Computational Biology,
Vol. 3, No. 2, pp.185-205, 2005.

Ding, C and Peng HC, Proc. 2nd IEEE Computational Systems Bioinformatics Conference (CSB 2003),
pp.523-528, Stanford, CA, Aug, 2003.

** Note that you need to download the mutual information computing toolbox of the same author. ***

MATLAB release MATLAB 6.0 (R12)
Other requirements The mutual information computing toolbox in the same category, by the same author Hanchuan Peng.
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Comments and Ratings (5)
10 May 2007 Kim Duncan  
27 May 2007 Tom Kallios

nice work and the detected features are good. Should be better if the mutual info tools were put together ...

04 Oct 2007 Senoussi Hafida

Thank's for the source but I've not find the function mutualinfo in matlab R12 thus I can not run the algorithm. please can you help me.

20 Jan 2008 eta eta

i need it

23 Sep 2010 György Kovács

I have downloaded the mutual information toolbox too, but when I try to call either mrmr_mid_d or mrmr_miq_d, matlab gives me the following error message:
"??? Undefined command/function 'mutualinfo'."
What can be the cause?
Any help appreciated. Thanks in advance.

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Tag Activity for this File
Tag Applied By Date/Time
statistics Hanchuan Peng 22 Oct 2008 09:12:12
probability Hanchuan Peng 22 Oct 2008 09:12:12
minimumredundancy Hanchuan Peng 22 Oct 2008 09:12:12
feature selection Hanchuan Peng 22 Oct 2008 09:12:12
mutual information Hanchuan Peng 22 Oct 2008 09:12:12
feature selection Sunny 12 Jan 2009 05:02:44
feature selection dd du 23 Sep 2009 11:41:22
feature selection Benjamin Mack 24 Feb 2010 12:43:41
feature selection Benjamin Bechtel 13 Sep 2011 05:23:58
feature selection fatma 10 Nov 2011 11:13:25

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