No BSD License
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Ansoft2FEA(varargin)
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FEA_Ve(varargin)
xmean=mean(minmax);
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Find_Ith_GUI(varargin)
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gui_Iexstim(varargin)
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gui_Iinstim(varargin)
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gui_channel(varargin)
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gui_environment(varargin)
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gui_time(varargin)
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neuroFEM(varargin)
figure
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neuroFEM_ana(varargin)
This function is called by NeuroFEA. It allows you to choose and plot Ve of any axon loaded in NeuroFEA.
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varargout=gui_var(varargin)
if isempty(zeng2.var{varnumber}.Ilk) %Defined in Insert
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zexst(varargin)
FEA_Ve
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zview3d(varargin)
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FEA_Ve_HFBlock(varargin)
find the high frequency blocking threshold for the below model file.
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Find_Ith(varargin)
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Gate_Trap(oldgate,dt,alfa,bet...
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HFblock_th(varargin)
find the high frequency blocking threshold for the below model file.
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Iexstim(xyz,varargin)
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Iinstim(name,node,varargin)
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STN_Otsuka(varargin)
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[Amplitude]=Douple_Pulse(t)
Input
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[Amplitude]=Isin(t)
Input
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[Amplitude]=Isin(t)
Input
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[Amplitude]=Isintha(t)
Input
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[Amplitude]=Isinthc(t)
Input
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[Amplitude]=SquarePulse(t)
Input
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[Amplitude]=SquarePulse(t)
Input
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[Amplitude]=SquarePulse(t)
Input
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[G,E,constant_G,constant_E]=c...
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[Vout]=V_backward(vm,dt,stimV...
zeng.dummyvm(:,i),dt,stimVe,StimIin,zeng.setup.lamda_dt_matrix,Gamma_dt,Omega_dt
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[hd]=fea_yz
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[varlist]=showglobal
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[xyz] =setxyz(xyzi,xyzc,L,nse...
xyzi=vector
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[xyzd, Axons_Number, Bin_Size...
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apply
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connect( name1,node1p,name2,n...
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create(name,varargin)
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create_StimVe
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create_dummymodel
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create_dummyvar
zeng2.dummyvar is used during the calculation and will be deleted when the
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create_initial(varargin)
Let's do all stupid things before starting the simulation
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create_matrix
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create_setting
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create_stimIin
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fea_import
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fea_ve(VariableName,varargin)
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hh(varargin)
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insert(name,newmodel)
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schwarz(varargin)
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zcal_I
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zdummy_return
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zrun(varargin)
the performance can be increased by precombining some operations.
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Ex_01_simple_soma.m
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Ex_02_simple_dendrite.m
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Ex_03_simple_axon.m
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Ex_04_axon_with_myelin.m
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Ex_05_axon_with_finite_myelin...
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Ex_06_Iext_axon.m
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Ex_07_Iext_axon_with_myelin.m
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Ex_07_Iext_axon_with_myelin_b...
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Ex_08_Simple_Neuron.m
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Ex_08_Simple_Neuron_Iext.m
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FEA_Iext_axon_with_myelin.m
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FEA_Iext_axon_with_myelin_bip...
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FEA_Iext_axon_with_myelin_bip...
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FEA_Ve_recruitment.m
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FindIth.m
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FindIth_Iext_axon.m
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FindIth_Iext_axon_C1A2.m
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FindIth_Iext_axon_C2A3.m
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FindIth_Iext_axon_Infinite_Ar...
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LG-1-4.m
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LG-2-4.m
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LG-3-4-Soleus.m
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LG-4-4.m
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LG-All.m
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LGM-1-4.m
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LGM-2-4.m
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LGM-3-4-Soleus.m
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LGM-4-4.m
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One-10.m
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Peak_Fe.m
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S2-Ven-Young-Left.m
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S3-Ven-Young-Left.m
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S3-Ven-Young-Right.m
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Uniform.m
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Uniform100.m
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Uniform20.m
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Uniform200.m
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Uniform300.m
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Uniform400.m
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Uniform77.m
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Uniform770.m
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neurocal.m
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show.m
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test.m
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View all files
Neurocal
by Zeng Lertmanorat
10 Apr 2002
(Updated 19 Oct 2007)
Simulation describing the electrical activity of nerve cell (neuron) by solving cable equation
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Watch this File
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| File Information |
| Description |
Simulation describing the electrophysiological behavior of a biological neuron (nerve cell). Two sets of membrane kinetics are included: Hodgkin-Huxley and Schwarz for unmyelinated and myelinated axons. |
| MATLAB release |
MATLAB 6.5.1 (R13SP1)
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| Comments and Ratings (4) |
| 15 Apr 2002 |
Dale Clifford
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| 18 Nov 2003 |
Ming Yia
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| 30 Dec 2003 |
DIONNYS MORAN
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| 10 Jul 2008 |
Thomas Eriksson
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| Updates |
| 10 Apr 2002 |
The previous one I submitted did not have the manual. The new one does. It will be helpful. |
| 11 Apr 2002 |
My program is very complicated. The new version has its manual included |
| 20 May 2002 |
To increase the speed of numerical calculation, the variable-time-step option is added. |
| 27 Jan 2003 |
-Improve the GUI for extracellular stimulation by automatically adjusting the coordinates of nodes for calculating the extracellular voltage.
-Change the program structure for future improve (Give me sometime). |
| 03 Feb 2003 |
-Add Plot 2D vs Space. |
| 06 May 2003 |
-My previous upload was done with V6.5, making it unuseable for V6.0. This uplad is done with V6.0 and also work with V6.5.
-The source won't be able available until I have time to put on all comments. |
| 22 Mar 2004 |
-Stimulator can be set as a function of time
-Source code |
| 19 Apr 2004 |
-bug fix for the stimulation as a function of time |
| 29 Nov 2004 |
- Minor bug fix
- Change how the XYZ is created. |
| 19 Oct 2007 |
- Minor bug fix of some GUI
- I will update more documents next time explaining how to integrate you Matlab script into Neurocal. |
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