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Taxonomic Annotation of BLAST Reports

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Taxonomic Annotation of BLAST Reports

by Paola Favaretto

 

17 Aug 2007 (Updated 18 Aug 2007)

Annotate BLAST reports with taxonomic information

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Description

This demo illustrates a simple approach to perform taxonomy annotation of BLAST hits. It requires three taxonomy files gi_taxid_prot.dmp, names.dmp and nodes.dmp, which can be downloaded from the NCBI taxonomy FTP site.
MATLAB release MATLAB 7.4 (R2007a)
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biotech Paola Favaretto 22 Oct 2008 09:23:17
pharmaceutical Paola Favaretto 22 Oct 2008 09:23:17
taxonomy Paola Favaretto 22 Oct 2008 09:23:17
blast Paola Favaretto 22 Oct 2008 09:23:17
ncbi Paola Favaretto 22 Oct 2008 09:23:17
annotation Paola Favaretto 22 Oct 2008 09:23:17
bioinformatics Paola Favaretto 22 Oct 2008 09:23:17
blast yasmeen hadadd 20 Apr 2011 12:59:57

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