COMPUTEGTOM computes the generalized overlaping measure algorithm (GTOM) [1]
Authors
Joaquin Goñi <jgoni@unav.es>
&
Iñigo Martincorena <imartincore@alumni.unav.es>
University of Navarra -
Dpt. of Physics and Applied Mathematics &
Centre for Applied Medical Research. Pamplona (Spain).
November 22nd, 2007
batchComputeGTOM.m contains an example that loads and adjacency matrix and computes the GTOM matrix. Finally, a hierarchical clustering of GTOM matrix is carried out.
Type 'help computeGTOM' for further information and examples.
References
GTOM [1] Yip A, Horvath S (2007) Gene network interconnectedness and the generalized topological overlap measure BMC Bioinformatics 2007, 8:22
TOM [2] Ravasz E. et al. (2002) Hierarchical Organization of Modularity in Metabolic Networks Science 297 (5586), 1551. |
