Code covered by the BSD License
Highlights from
Viewer3D
- ErrorData3D(varargin) ERRORDATA3D M-file for ErrorData3D.fig
- InfoData3D(varargin) INFODATA3D M-file for InfoData3D.fig
- ReadData3D(varargin) This function ReadData3D allows the user to open medical 3D files. It
- choose_from_list(varargin)
- raw_read_header(varargin) function for reading header of raw volume file
- viewer3d(varargin) VIEWER3D a Matlab 3D volume renderer using the fast shearwarp algorithm.
- viewer3d(varargin) VIEWER3D is a Matlab GUI for fast shearwarp volume rendering. It also
- viewer3d_about(varargin) VIEWER3D_ABOUT M-file for viewer3d_about.fig
- viewer3d_about(varargin) VIEWER3D_ABOUT M-file for viewer3d_about.fig
- viewer3d_console(varargin) VIEWER3D_CONSOLE M-file for viewer3d_console.fig
- viewer3d_contrast(varargin) VIEWER3D_CONTRAST M-file for viewer3d_contrast.fig
- viewer3d_dicominfo(varargin) VIEWER3D_DICOMINFO M-file for viewer3d_dicominfo.fig
- viewer3d_error(varargin) VIEWER3D_ERROR M-file for viewer3d_error.fig
- viewer3d_error(varargin) VIEWER3D_ERROR M-file for viewer3d_error.fig
- viewer3d_histogram(varargin) This function is part of VIEWER3D
- viewer3d_histogram(varargin) This function is part of VIEWER3D
- viewer3d_lightvector(varargin) VIEWER3D_LIGHTVECTOR M-file for viewer3d_lightvector.fig
- viewer3d_qualityspeed(varargi... VIEWER3D_QUALITYSPEED M-file for viewer3d_qualityspeed.fig
- viewer3d_segment(varargin) VIEWER3D_SEGMENT MATLAB code for viewer3d_segment.fig
- viewer3d_voxelsize(varargin) VIEWER3D_VOXELSIZE M-file for viewer3d_voxelsize.fig
- viewer3d_workspacevars(vararg... VIEWER3D_WORKSPACEVARS M-file for viewer3d_workspacevars.fig
- B=SnakeInternalForceMatrix2D(... % B=SnakeInternalForceMatrix2D(nPoints,alpha,beta,gamma)
- B=SnakeInternalForceMatrix3D(... % B=SnakeInternalForceMatrix3D(F,alpha,beta,gamma)
- ExternalForceImage2D(I,Wline,... Eextern = ExternalForceImage2D(I,Wline, Wedge, Wterm,Sigma)
- ExternalForceImage3D(I,Wline,... Eextern = ExternalForceImage3D(I,Wline, Wedge,Sigma)
- FV=MakeContourClockwise3D(FV) This function MakeContourClockwise will make a surface clockwise
- FV=Snake3D(I,FV,Options) This function SNAKE implements the basic snake segmentation. A snake is an
- FV=SnakeMoveIteration3D(B,FV,... This function will calculate one iteration of contour Snake movement
- Fext=GVFOptimizeImageForces2D... This function "GVFOptimizeImageForces" does gradient vector flow (GVF)
- Fext=GVFOptimizeImageForces3D... This function "GVFOptimizeImageForces" does gradient vector flow (GVF)
- I=bitmapplot(x,y,Ibackground,... BITMAPPLOT, Linear plot in bitmap.
- I=bitmaptext(lines,I,pos,opti... The function BITMAPTEXT will insert textline(s) on the specified position
- I=imgaussian(I,sigma,siz) IMGAUSSIAN filters an 1D, 2D color/greyscale or 3D image with an
- Iout=affine_transform_2d_doub... Affine transformation function (Rotation, Translation, Resize)
- Iout=warp(Ibuffer, Ioutsizes,... This function warp, will warp the shear rendered buffer image
- J=DrawSegmentedArea2D(P,Isize... Draw the contour as one closed line in a logical image,
- J=ImageDerivatives2D(I,sigma,... Gaussian based image derivatives
- J=ImageDerivatives3D(I,sigma,... Gaussian based image derivatives
- K=InterpolateContourPoints2D(... This function resamples a few points describing a countour , to a smooth
- Mview=makeViewMatrix(r,s,t) function makeViewMatrix construct a 4x4 transformation matrix from
- Mview=makeViewMatrix(r,s,t) function makeViewMatrix construct a 4x4 transformation matrix from
- N=GetContourNormals2D(P) This function calculates the normals, of the contour points
- N=PatchNormals3D(FV) This function PATCHNORMALS calculates the normals of a triangulated
- P=MakeContourClockwise2D(P) This function MakeContourClockwise will make a contour clockwise
- P=SnakeMoveIteration2D(B,P,Fe... This function will calculate one iteration of contour Snake movement
- V=hdr_read_volume(info) function for reading volume of HDR/IMG Analyze ( .hdr ) volume file
- V=raw_read_volume(info) function for reading volume of raw volume file
- [K1 KN ERR]=SeparateKernel(H) This function SEPARATEKERNEL will separate ( do decomposition ) any
- [Mshear,Mwarp2D,c]=makeShearW... Function MAKESHEARWARPMATRIX splits a View Matrix in to
- [Nx,Ny,Nz]=PatchNormalsDouble...
- [P,J]=Snake2D(I,P,Options) This function SNAKE implements the basic snake segmentation. A snake is an
- [info] =gipl_read_header(file... function for reading header of Guys Image Processing Lab (Gipl) volume file
- [x,y,z]=interpcontour(x,y,z,s...
- data=getMyData(handle) Get data struct stored in figure
- datasets=dicom_folder_info(li... Function DICOM_FOLDER_INFO gives information about all Dicom files
- dicom_read_volume(info) function for reading volume of Dicom files
- dicom_write_volume(Volume,fil... This function DICOM_WRITE_VOLUME will write a Matlab 3D volume as
- gipl_read_volume(info) function for reading volume of Guys Image Processing Lab (Gipl) volume file
- gipl_write_volume(I,fname,sca... Function for writing Guys Image Processing Lab (Gipl) files.
- image_interpolation(Iin,Tloca... This function is used to transform an 2D image, in a backwards way with an
- index=structfind(a,field,valu... StructFind, Find the index of a certain string or value in a struct
- info =mha_read_header(filenam... Function for reading the header of a Insight Meta-Image (.mha,.mhd) file
- info =par_read_header(filenam...
- info =vff_read_header(filenam...
- info =vtk_read_header(filenam... Function for reading the header of a Visualization Toolkit (VTK)
- info=dicom_read_volume(filena... function for reading header of Dicom volume file
- info=hdr_read_header(filename... function for reading header of HDR/IMG Analyze ( .hdr ) volume file
- isi_read_header(filename) function for reading header of isi volume file
- isi_read_volume(info) function for reading volume of isi volume file
- menubar(varargin) This function MenuBar, allows the user to create menu's anywhere in a figure
- mha_read_volume(info) Function for reading the volume of a Insight Meta-Image (.mha, .mhd) file
- nii_read_header(filename) function for reading header of NifTi ( .nii ) volume file
- nii_read_volume(info) function for reading volume of NifTi ( .nii ) volume file
- par_read_volume(info)
- render(volume,options) Function RENDER will volume render a image of a 3D volume,
- render_bw(V, image_size, Mvie... Function RENDER_BW will volume render a Image of a 3D volume with
- render_bw(volume, axes_size, ... Function RENDER_BW will volume render a Image of a 3D volume with
- render_color(V, image_size, M... Function RENDER_COLOR will volume render a Image of a 3D volume with
- render_color(volume, axes_siz... Function RENDER_COLOR will volume render a Image of a 3D volume with
- render_mip(V, image_size, Mvi... Function RENDER_MIP will render a Maximum Intensity Image of a 3D volume
- render_mip(volume, image_size... Function RENDER_MIP will render a Maximum Intensity Image of a 3D volume
- render_shaded(V, image_size, ... Function RENDER_SHADED will volume render a shaded Image of a 3D volume,
- render_shaded(volume, axes_si... Function RENDER_SHADED will volume render a shaded Image of a 3D volume,
- setMyData(data,handle) Store data struct in figure
- v3d_read_header(filename) function for reading header of V3D Philips Scanner ( .v3d )
- v3d_read_volume(info) function for reading volume of V3D Philips Scanner ( .v3d )
- v3d_write_volume(I,fname,scal... Function for writing V3D volume files version R6.1
- vff_read_volume(info) Function for reading the volume from a Visualization Toolkit (VTK)
- vmp_read_header(filename) function for reading header of VMP BrainVoyager ( .vmp )
- vmp_read_volume(info) function for readingV MP BrainVoyager ( .vmp ) volume file
- vtk_read_volume(info) Function for reading the volume from a Visualization Toolkit (VTK)
- xif_read_header(filename) function for reading header of XIF HDllab/ATL ultrasound ( .xif )
- xif_read_volume(info) function for reading volume of XIF HDllab/ATL ultrasound ( .xif )
- compile_c_files.m
- Viewer3D Help
- Viewer3D Help
- View all files
from
Viewer3D
by Dirk-Jan Kroon
MIP, Color, Slice and Shaded 3D (shearwarp) Volume Rendering, interactive 3D view/measurement GUI |
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