from
Genomic signature using FCGR
by Jesús P. Mena-Chalco
Genomic signature using Chaos game representation of frequencies.
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| test.m |
% Genomic signature using Chaos game representation of frequencies
%
% TEST
% Subsequence of the Archeoglobus fulgidus genome (104160 bp)
figure;
for i=2:2:8
subplot(1,4,i/2)
matrix = fcgr2('afulgidus_part.fasta', i);
imagesc(matrix);
axis square;
axis off;
title(i);
% colorbar;
end;
%% Archeoglobus fulgidus genome (2.2Mb)
% figure;
% for i=2:2:8
% subplot(1,4,i/2)
% matrix = fcgr2('afulgidus.fasta', i);
% imagesc(matrix);
% axis square;
% axis off;
% title(i);
% % colorbar;
% end;
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