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Highlights from
emukamel/CellSort

  • CellsortICA_Optimize.m
  • CellsortICA.m
  • CellsortApplyFilter(fn, i...
    cell_sig = CellsortApplyFilter(fn, ica_segments, flims, movm, subtractmean)
  • CellsortChoosePCs(fn, mix...
    [PCuse] = CellsortChoosePCs(fn, mixedfilters)
  • CellsortFindspikes(ica_si...
    [spmat, spt, spc, zsig] = CellsortFindspikes(ica_sig, thresh, dt, deconvtau, normalization)
  • CellsortICAplot(mode, ica...
    CellsortICAplot(mode, ica_filters, ica_sig, f0, tlims, dt, ratebin, plottype, ICuse, spt, spc)
  • CellsortPCA(fn, flims, nP...
    [mixedsig, mixedfilters, CovEvals, covtrace, movm, movtm] = CellsortPCA(fn, flims, nPCs, dsamp, outputdir, badframes)
  • CellsortPlotPCspectrum(fn...
    CellsortPlotPCspectrum(fn, CovEvals, PCuse)
  • CellsortSegmentation(ica_...
    [ica_segments, segmentlabel, segcentroid] = CellsortSegmentation(ica_filters, smwidth, thresh, arealims, plotting)
  • View all files
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emukamel/CellSort

by

 

25 Sep 2009 (Updated )

Toolbox for automated sorting of cellular calcium signals from optical imaging data.

github_repo.zip
emukamel-CellSort-736d717/CellsortApplyFilter.m
emukamel-CellSort-736d717/CellsortChoosePCs.m
emukamel-CellSort-736d717/CellsortFindspikes.m
emukamel-CellSort-736d717/CellsortICA.m
emukamel-CellSort-736d717/CellsortICAplot.m
emukamel-CellSort-736d717/CellsortICA_Optimize.m
emukamel-CellSort-736d717/CellsortPCA.m
emukamel-CellSort-736d717/CellsortPlotPCspectrum.m
emukamel-CellSort-736d717/CellsortSegmentation.m
emukamel-CellSort-736d717/doc/CellsortApplyFilter.html
emukamel-CellSort-736d717/doc/CellsortChoosePCs.html
emukamel-CellSort-736d717/doc/CellsortFindspikes.html
emukamel-CellSort-736d717/doc/CellsortICA.html
emukamel-CellSort-736d717/doc/CellsortICAplot.html
emukamel-CellSort-736d717/doc/CellsortPCA.html
emukamel-CellSort-736d717/doc/CellsortPlotPCspectrum.html
emukamel-CellSort-736d717/doc/CellsortSegmentation.html
emukamel-CellSort-736d717/doc/images/alpha.png
emukamel-CellSort-736d717/doc/images/c++.png
emukamel-CellSort-736d717/doc/images/c.png
emukamel-CellSort-736d717/doc/images/demoicon.gif
emukamel-CellSort-736d717/doc/images/down.png
emukamel-CellSort-736d717/doc/images/fortran.png
emukamel-CellSort-736d717/doc/images/hp.png
emukamel-CellSort-736d717/doc/images/left.png
emukamel-CellSort-736d717/doc/images/Linking to Harvard Library E-Resources - Harvard College Library.webarchive
emukamel-CellSort-736d717/doc/images/linux.png
emukamel-CellSort-736d717/doc/images/matlabicon.gif
emukamel-CellSort-736d717/doc/images/mex.png
emukamel-CellSort-736d717/doc/images/Mukamel1a.jpg
emukamel-CellSort-736d717/doc/images/right.png
emukamel-CellSort-736d717/doc/images/sgi.png
emukamel-CellSort-736d717/doc/images/simulinkicon.gif
emukamel-CellSort-736d717/doc/images/solaris.png
emukamel-CellSort-736d717/doc/images/up.png
emukamel-CellSort-736d717/doc/images/windows.png
emukamel-CellSort-736d717/doc/index.html
emukamel-CellSort-736d717/doc/m2html.css
emukamel-CellSort-736d717/README.md
emukamel-CellSort-736d717/README.rtf

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