Burrows-Wheeler Matrix (BWM) Transform

Version 1.1.0.0 (3.36 KB) by Michael Chan
Illustrates the Burrows-Wheeler Matrix (BWM) Transform.
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Updated 25 Oct 2010

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main executing reference usage: usage_BurrowsWheelerTransform.m

For this program, the '$' has to be explicitly stated.

The objective is to illustrate Burrows-Wheeler Matrix (BWM) Transform.

BWT(agcagcagact) = tgcc$ggaaaac

BWM =

$agcagcagact
act$agcagcag
agact$agcagc
agcagact$agc
agcagcagact$
cagact$agcag
cagcagact$ag
ct$agcagcaga
gact$agcagca
gcagact$agca
gcagcagact$a
t$agcagcagac

* Caveat : Educational Purposes
It does not include the pattern search.

If the demo has more elegant presentation, please do not hesitate to suggest and send feedback to author.
Email: promethevx@yahoo.com.

Thank you.

Regards,
Michael Chan JT

Cite As

Michael Chan (2024). Burrows-Wheeler Matrix (BWM) Transform (https://www.mathworks.com/matlabcentral/fileexchange/29126-burrows-wheeler-matrix-bwm-transform), MATLAB Central File Exchange. Retrieved .

MATLAB Release Compatibility
Created with R2010a
Compatible with any release
Platform Compatibility
Windows macOS Linux
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Version Published Release Notes
1.1.0.0

Description updated.
1.0.0.0