Code covered by the BSD License  

Highlights from
FRETSCAL

• batch
• brightpatch Version 4/3/09 Runs to bright patch filter. Also can be run as a
• cull_callback Version 4/3/09 The window that opens when you select cull.
• cull_callback2 Version 4/3/09
• fabout Version 4/3/09 Displays the about window. Called by Fretscal>Summary>About
• fdistribution2( flag ) Version 4/3/09 Called to display a distribution and by writefinal to
• fgetCFPspill Version 4/3/09
• fgetCFPtag Version 4/3/09 The splash window to input the name of the protein tagged
• fgetCFPtag2 Version 4/3/09 The splash window to input the name of the protein tagged
• fgetYFPspill Version 4/3/09
• fgetYFPtag Version 4/3/09 The splash window to input the name of the protein tagged
• fgetYFPtag2 Version 4/3/09 The splash window to input the name of the protein tagged
• fgetcontext Version 4/3/09
• fgetfont Version 4/3/09
• fgetinput Version 4/3/09 Displays the choose input directory dialog.
• fgetinput2 Version 4/3/09 To input strain, without update. Used by fsearch when
• fgetintensitylimit Version 4/3/09 This yields the splash window where one decides what
• fgetmaximumpeaks Version 4/3/09 The splash screen where you input the maximum number of
• fgetmaxmove Version 4/3/09 The splash screen where you input the maximum number of
• fgetoutput Version 4/3/09 Brings up the get output window, and calls h_getoutput.
• fgetseparation Version 4/3/09 The splash screen where you input the minumum separation between
• fgetstrain Version 4/3/09 Displays the window where one enters the name of the
• fgetstrain2 Version 4/3/09 Same as fgetstrain without the update. Used by fsearch if values are
• fgettype Version 4/3/09 This opens the splash screen with the radio buttons that
• fimage Version 4/3/09 This opens the window where the user enters the general
• fmaxpix Version 4/3/09 Displays the window that gets called with max pixel intensity.
• fquestimage1
• fquestimage2
• freaddata( filename, initial ) Version 4/3/09
• freadlast( settings, flag ) Version 4/3/09 Reads in the settings from the prefs.txt file in
• frestoredefaults Version 4/3/09 This program restores the original default settings that
• fret( varargin ) Version 4/3/09 This is the script that does all the real work.
• fretscal Version 1/5/11
• fsearch2_callback Version 4/3/09
• fsearch_callback Version 4/3/09. Displays a summary of the settings before launching the search with
• fupdate Version 4/3/09
• fwritefinal Version 4/3/09 Writes out the final results
• fwritelast( step ) Version 4/3/09
• fwriteline2cull( fjmp ) Version 4/3/09 Writes the second line of the output files after culling,
• getAOIshape Version 4/3/08 The window where one inputs the dimension of the
• getboundary Version 4/3/09 Presents the splash screen where one enters the inner and
• getculllimits Version 4/3/09 Loads the window where one inputs the limits for culling
• getsearchlimits Version 4/3/09 Displays the window that gets called with search limits. Many of the
• questiondialog() Version 4/3/09 During the walkthrough, this puts up the dialog box asking
• restoreprefsdefaults Version 4/3/09 Called by restore user prefs to load the prefs.txt file
• summarystats( statsfile ) Version 4/3/09
• walkans_callbackneg Version 4/3/09 Gets called when one rejects a file during walkthrough.
• walkans_callbackpos Version 4/3/09 Gets called when on accepts an AOI during walkthrough.
• walkans_callbackquit Version 4/3/09 Gets called when one chooses to quit during a walkthrough.
• walkthru Version 4/3/09 Throws up the summary splash screen for the walkthrough
• walkthru_callback Version 4/3/09
• walkthru_guts( fin, processed... Version 4/3/09 As the name implies, this is the script that sorts
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