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Aslak Grinsted (view profile)


07 Jul 2011 (Updated )

Quantile regression with bootstrapping confidence intervals

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Quantile Regression

  USAGE: [p,stats]=quantreg(x,y,tau[,order,nboot]);
    x,y: data that is fitted. (x and y should be columns)
         Note: that if x is a matrix with several columns then multiple
         linear regression is used and the "order" argument is not used.
    tau: quantile used in regression.
    order: polynomial order. (default=1)
    nboot: number of bootstrap surrogates used in statistical inference.(default=200)
  stats is a structure with the following fields:
       .pse: standard error on p. (not independent)
       .pboot: the bootstrapped polynomial coefficients.
       .yfitci: 95% confidence interval on polyval(p,x)
  Note: uses bootstrap on residuals for statistical inference. (see help bootstrp)
  check also:
  legend('data','2nd order 90th percentile fit','95% confidence interval','location','best')
  For references on the method check e.g. and refs therein:
   Copyright (C) 2008, Aslak Grinsted


This file inspired Non Crossing Polynomial Quantile Regression.

Required Products Optimization Toolbox
Statistics and Machine Learning Toolbox
MATLAB release MATLAB 7 (R14)
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Comments and Ratings (16)
06 Jul 2016 Yao RuiQi

hi,Aslak.I have some questions to ask you.Now I want to use this code to estimate the parameters of model.For example.x1=a*x2+b*x3+c*x4+d*x2.^2+e*x3.^2+f*x4.^2...

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29 Feb 2016 Xiaoyang Dong

Correction: Not coefficient estimates. I mean standard errors.

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29 Feb 2016 Xiaoyang Dong

Hi Aslak, thanks for your contribution. I'm wondering why when I switch the order of [x1,x2] to [x2,x1], the coefficients estimates lose the rotation invariance property?

13 Jan 2016 Zhongfang He

Hi Aslak, first thank you very much for sharing the code.

A quick question is about the way the standard errors of the parameter estimates are bootstrapped in your code. For many cross-sectional data, it is not unreasonable to assume independence btw data points where it is fine to use the bootstrap method in your code. However, if one is dealing with time series data, there is usually serial correlation btw data points, a more suitable bootstrap method should be used, e.g. the stationary bootstrap of Politis&Romano(1994). I would suggest that the independence assumption is explicit in the code description and perhaps have another code specifically for correlated data points. Best regards, Zhongfang

13 Oct 2015 Aslak Grinsted

Aslak Grinsted (view profile)

@lisa: they are the polynomial coefficients. They can be interpreted similar to the ouput from polyval

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20 Sep 2015 Lisa

Lisa (view profile)

Hi, very helpful code, thank you.
A quick question: p outputs several values depending on the order, what do they represent?

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16 Mar 2015 Aslak Grinsted

Aslak Grinsted (view profile)

@SimeonYurek: thank you for the suggestion. It has been implemented.

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13 Aug 2014 wei

wei (view profile)

hi. just a quick question. How do we calculate the goodness of fit for quantile regression? thanks

20 May 2014 Simeon Yurek

Very nice code for Koenker and Hallock (2001). Thanks for posting.

One question: in your statement of the function rho (line 85), when r >= 0 (all positive residuals above x*p), does the function reduce to abs(r), and thus is not weighted by tau? It's true that [r - 0.*r/tau] = r.*tau, but is the tau lost (being multiplied by zero)? Could you have stated instead:


and this way weight both over and under residuals? The stats for the bootstrap are slightly less robust but not by much. Please let me know if I'm off.

Antony: help fminsearch. 'MaxFunEvals' and 'MaxIter' can be defined as options.

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22 Jan 2014 Antony

Antony (view profile)

Hi, first of all, thank you very much for the code.

When I run the code I get the following message:

"Exiting: Maximum number of function evaluations has been exceeded
- increase MaxFunEvals option.
Current function value: 3183.464509 "

I get this message a number of times with just the current function value changing.
While it is not an error message and I still obtain the estimations I need, I was wondering if this had any influence on the validity of my results.

Thank you in advance for anyone who can help me out here.

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21 Aug 2012 Wolfgang Schwanghart

Excellent. Well written help and code! Runs as advertised!

17 Apr 2012 Satis

Satis (view profile)

If X and y have some missing observations, then

[p,stats]=quantreg(X,y,.9); does not work. I got error message.

Could you please suggest me how to resolve this problem??

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08 Aug 2011 Aslak Grinsted

Aslak Grinsted (view profile)

@mohammad: The code does do MLR. Here's an example with multiple predictors:

y=X*[4 2 4 1]'+randn(100,1)*.2;

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07 Aug 2011 Niki

Niki (view profile)

In fact I wanted to run this M-file for multi column X, but I got error, so it is not implement for MLR? if it is , could you please put an example? because when I do not mention Order , I get error when i mention it is not MLR

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08 Jul 2011 Aslak Grinsted

Aslak Grinsted (view profile)

Thanks for the comment, and suggestions for improvement. I've just uploaded a new version (it should be online shortly).

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07 Jul 2011 AS

AS (view profile)

One unexpected thing with this code. Suppose I have a Y vector and want to regress it on one explanatory variable, but also include a constant in my regression. Then my X matrix has 2 columns, the first column is just ones, the second is the explanatory variable. It should still be possible to plot this along with the results from the regression.

Currently, however, if you run:
quantreg([ones(length(x),1) x], y,.5)
You get an error because it tries to plot it, but order has been set (line 44) to [], so things get messed up.

Additionally, the plots that do get produced look odd because the default is to draw lines between all of the points, which usually isn't what you want. For example, this doesn't look like what it should:

Finally, there's a problem with the error checking of inputs (lines 41-47) because it's all one big if-else statement. If you only put in three inputs, then line 44 runs and order gets set to [], but then the program exits the if-else statement and so Nboot never gets set correctly. You should split these up into separate if statements because if there are only 3 inputs then you need to set both order and Nboot.

08 Jul 2011 1.1

Fixed a few issues with input parameter parsing.

08 Jul 2011 1.2

Fixed another small bug.

16 Mar 2015 1.3

implemented suggested change from Simeon Yurek in a FEX comment

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