Cell Segmentation and Tracking

Version 1.1.0.0 (935 KB) by Fanny Vatter Pelissier
This program opens a GUI, segments and tracks cells from videos using the parallelization toolbox.
2.3
(3)
2.2K Downloads
Updated 17 Jan 2012

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This program has been developed in collaboration with LCSB and BIOp at EPFL, Lausanne. It is specific for a microwell experiment with brightfield pictures and GFP expressing cells pictures. It uses a well detection part, then a segmentation part using watershed and a tracking part using the hungarian method for assignment problem. This program is specific for an experiment but users would be interested to use some parts of the code for their own program.

Cite As

Fanny Vatter Pelissier (2024). Cell Segmentation and Tracking (https://www.mathworks.com/matlabcentral/fileexchange/34233-cell-segmentation-and-tracking), MATLAB Central File Exchange. Retrieved .

MATLAB Release Compatibility
Created with R2011b
Compatible with any release
Platform Compatibility
Windows macOS Linux
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Cell Tracking/GUI/

Cell Tracking/LevelSetMethods/

Cell Tracking/WDETV2/EXCEL LOG/

Cell Tracking/WDETV2/New Samy/

Cell Tracking/WDETV2/Well Detection/

Version Published Release Notes
1.1.0.0

Update on the description
1.0.0.0