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LDA for high dimension small sample size data

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LDA for high dimension small sample size data

by Bilwaj Gaonkar

 

18 Mar 2012

Linear discriminant analysis when the data dimensionality is high and sample size is much smaller

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For medical imaging/ biological data where typically data dimensionality is huge typical LDA applications fail on account of attempting to invert an impossibly large matrix. This can be remedied using the kernel trick. The current file attempts to do this.

 I have made an attempt to put in appropriate comments in the code and this code is inspired by several previous codes submitted on matlab central. I could not find an equivalent very easily. Hence I have submitted this file so that other biology related people here do not have to go through the pain of reimplementing it

MATLAB release MATLAB 7.8 (R2009a)
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biotech, image analysis, lda, linear discriminant analysis, medical, signal processing, statistic
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