Code covered by the BSD License

PATCH_3Darray(varargin) PATCH_3Darray Plot a 3D array using patch to create a quadrangular surface mesh
getTightSubplotHandles(FIG_MA... GETTIGHTSUBPLOTHANDLES return handles to subplots of with the specified spacing
plot_brain2d(x,meta,nrow,ncol... PLOT_BRAIN2D Plot slices of a brain image
plot_brain2d_alt(img,nrow,nco... PLOT_BRAIN2D_ALT Plot slices of a brain image (3d matrix)
plot_brain3d(x,meta,erode_lay... PLOT_BRAIN3D Plot a 3d brain image
plot_brain3d_alt(x,erode_laye... PLOT_BRAIN3D Plot a 3d brain image
sanePColor(varargin) SANEPCOLOR simple wrapper for pcolor
slices(m,d) SLICES return a cell array of slices of a tensor along the specied dimension
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2d and 3d brain plots

11 Apr 2012 (Updated 22 Feb 2013)

Quickly and easily create 2d and 3d plots of fMRI data.

File Information
Description	Industry standard brain plotting programs are great for producing publication-quality images of brain data. However, these tools are often very slow. This suite of tools provides a means of quickly generating 2- or 3-dimensional plots of fMRI data that can be manipulated (e.g. rotated, modified) in real time. Although these tools may be used to produce publication-quality figures, the focus here is on speed and ease of use. These tools are intended to be used for quickly exploring and examining fMRI data, debugging fMRI analyses, etc.
Acknowledgements	Get Tight Subplot Handles, Slices, Sane P Color, and Plot A 3 D Array Using Patch inspired this file.
MATLAB release	MATLAB 7.13 (R2011b)
Other requirements	This file depends on: sanePColor (35601), getTightSubplotHandles (35435), slices (35436), and PATCH_3Darray (28497). These files are included in the download.

Tags for This File
Everyone's Tags	2d, 3d, brain, convenient, debug, easy, fmri, image, pcolor, plot, rotate, simple
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Updates
11 Apr 2012	updated documentation in plot_brain3d -- erode_layers parameter was incorrectly described in previous version.
25 Apr 2012	Include file dependencies in the download.
22 Feb 2013	added two new functions that plot from 3d matrices (tensors) rather than requiring the meta matrix.