A GUI for bacterial identification

A GUI for bacterial identification base on PNN and MDS.

Version 1.1.0.0 (24.6 KB)
523 Downloads
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7 Nov 2012

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This GUI is for bacterial identifcation developed by MATLAB. The GUI relies on the comparison of some optional biochemical results with probability matrix and can distinguish 270 bacterial Operational Taxonomic Units (OTUs). Probabilistic Neural Network (PNN) structure is used to acquire the most probable result of bacterial identification. And when an appropriate range of distance is chosen, the unkown bacterium and its allied OTUs in biochemical phenotype within the range can be illustrated in three-dimensional space by classical Multidimensional Scaling (MDS) method.

Cite As

juntao jia (2026). A GUI for bacterial identification (https://www.mathworks.com/matlabcentral/fileexchange/37938-a-gui-for-bacterial-identification), MATLAB Central File Exchange. Retrieved .

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General Information

MATLAB Release Compatibility

  • Compatible with any release

Platform Compatibility

  • Windows
  • macOS
  • Linux
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Version Published Release Notes
1.1.0.0

The number of names were reduced from 288 to 270 by deleting the repeated names, thus one name could correspond to more than one sets of biochemical results. The probability matrix also was modified.
1.0.0.0