This script demonstrates how graph theory can be used to segment retinal layers in optical coherence tomography images.
run the script by pressing F5.
I am working on a more comprehensive open source software package for computer-aided segmentation of retinal layers in optical coherence tomography images, which currently includes 1. automated segmentation of 6 reitnal layers and 2. GUI for examination and manual correction of the automated segmentation. It can be downloaded at my github page. http://pangyuteng.github.io/caserel
Chiu, Stephanie J., et al. "Automatic segmentation of seven retinal layers in SDOCT images congruent with expert manual segmentation." Optics express 18.18 (2010): 19413-19428.
Teng, Pang-yu. (2013). Caserel - An Open Source Software for Computer-aided Segmentation of Retinal Layers in Optical Coherence Tomography Images. Zenodo. 10.5281/zenodo.17893
@Bashir Isa Dodo, this code does not support opening of zip files, try unzipping the zip file and using the files within the zip file.
Hello, I tried running the code, by entering the folder path of the images, but I always get this error
Error using load
Unable to read file 'D:\Matlab TrialsCMF_v1.0.zip'. No such file or directory.
Error in updatedGTherorySimplified (line 35)
and I am sure the images are in the directory, I tried copying the images to separate directory, and still no change
Hope to get a feedback thanks
+minor revision in the description section.
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