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| Date | File | Tags |
Downloads (last 30 days) |
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| 19 Nov 2009 | Simulink Application Of Modele Pacemaker VI1 Cardiac ODE,relaxation oscillator,cardiac cell modeles,heart modele | 20 | 0 | |||
| 12 Nov 2009 |
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Applying Multivariate Classification in the Life Sciences with Statistics Toolbox Files from the webinar "Multivariate Classification in the Life Sciences with Statistics Toolbox" | 41 | 0 | ||
| 09 Nov 2009 |
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Excitatory and inhibitory post-synaptic potentials This code demonstrates Excitatory and Inhibitory Postsynaptic Potentials on a neuron. | 33 | 0 | ||
| 30 Oct 2009 |
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Counter. Counter. Hours, minutes and seconds. | 52 | 2 | ||
| 28 Oct 2009 | Temporizer. Matlab temporizer. | 29 | 1 | |||
| 09 Oct 2009 |
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SURFACE RECONSTRUCTION FROM SCATTERED POINTS CLOUD PART2 Builds a triangulated surface given a 3D points cloud. They do not need to be in the z=f(x,y) form. | 486 | 12 | ||
| 07 Oct 2009 |
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Clinical Test Performance The test calculate the performance of a clinical test based on the Bayes theorem | 191 | 1 | ||
| 23 Sep 2009 |
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3D TRIANGULATED MODELS COLLECTION A collection of 3d manifolds models with 3D points, triangles, outwards normals orientation. | 186 | 0 | ||
| 19 Sep 2009 |
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NSA - Negative Selection Algorythm Detect anomaly in signal using NSA | 12 | 0 | ||
| 08 Sep 2009 | Gaussian Pyramid Generates a gaussian pyramid for the given input image | 91 | 0 | |||
| 19 Aug 2009 |
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SURFACE RECOSTRUCTION FROM SCATTERED POINTS CLOUD PART3 The BallFretting algorithm designed for filled points cloud. | 196 | 0 | ||
| 14 Aug 2009 |
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INPOLYHEDRON TEST Fast InPolyedron Test to detects points inside manifold surface (even non convex ones). | 144 | 0 | ||
| 13 Aug 2009 |
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BASIC GEAR DESIGN Builds a simple 3D model of Spur gear given a few standard parameters. | 204 | 1 | ||
| 10 Aug 2009 |
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STL_Import: IMPORT FUNCTION FOR STL FILES STL_Import allows to import binary and ascii files in matlab compatible format | 195 | 0 | ||
| 24 Jul 2009 |
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PI Controller for Electrohydraulic Servoactuator Improvement of dynamic behavior of electrohydraulic servoactator by implementing a PI controller | 78 | 0 | ||
| 24 Jul 2009 |
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Transient Response of Electrohydraulic Servoactuator Transient responses of servoactator incorporating two-stage electrohydraulic servovalve | 45 | 0 | ||
| 17 Jul 2009 |
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MCGH Matlab toolbox with graphical interface to analysis DNA microarray-based comparative genomic hybridi | 15 | 0 | ||
| 13 Jul 2009 | Transformer: A Procedure to Estimate Proximate Analysis Determine carbohydrate, protein, lipid and inert contents as well as other inputs to the IWA-ADM1 | 46 | 0 | |||
| 25 Jun 2009 |
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CODIS Combined DNA Index System: a GUI tool for forensic paternity lawsuit | 95 | 0 | ||
| 20 Jun 2009 |
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Flex02-08D Correlator Interface A graphical user interface to the Flex02-08D hardware correlator accessing the Windows driver. | 98 | 1 | ||
| 20 Jun 2009 |
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Flex02-01D Correlator Interface A graphical user interface to the Flex02-01D hardware correlator accessing the Windows driver. | 145 | 1 | ||
| 18 Jun 2009 | MArray MArray: analysing single, replicated or reversed microarray experiments. | 13 | 0 | |||
| 16 Jun 2009 | ORMA (Oligonucleotide Retrieving for Molecular Applications) ORMA searches positions within multi-aligned sequences and designs oligonucleotide probes | 8 | 0 | |||
| 28 May 2009 | Maximum Cardinality matching constructs a (non-weighted) maximum cardinality matching | 38 | 2 | |||
| 22 May 2009 |
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MCShape Multiparticle Tracking algorithm for cell motion and morphology | 47 | 0 | ||
| 20 May 2009 |
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BeadFluct v1.0 Monte-Carlo simulation to calculate position of micronsized particles in optical trap | 19 | 2 | ||
| 15 May 2009 |
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CMorph Tracking algorithm for cell motion and morphology | 34 | 2 | ||
| 28 Apr 2009 | Agilent's USB Modular Scope U2701A and U2702A MATLAB Programming Example Shows how instrument connection is made, fetching of captured data and displaying of data | 128 | 0 | |||
| 28 Apr 2009 | MATLAB Programming Example for Agilent's U2600A USB Modular (DAQ) Digital IO module The U2651A is used as an example here. | 108 | 0 | |||
| 28 Apr 2009 | MATLAB Programming Example for U2500A USB Modular Data Acquisition (DAQ) module’s Digital IO This program sets the USB DAQ module’s first 8 Digital IO ports as digital outputs | 117 | 0 | |||
| 28 Apr 2009 | MATLAB Programming Example for U2500A USB Modular Data Acquisition (DAQ) module’s Analog Output Analog output sends out discrete values and the analog input is used to measure that value | 161 | 0 | |||
| 28 Apr 2009 | MATLAB Programming Example for U2500A USB Modular Data Acquisition (DAQ) module’s Analog Input This program sets the USB DAQ module to sample immediately without waiting for a trigger signal | 121 | 0 | |||
| 28 Apr 2009 | MATLAB Programming Example for U2300A USB Modular Data Acquisition (DAQ) module’s Digital IO This program sets the USB DAQ module’s first 16 Digital IO ports to be digital inputs | 155 | 0 | |||
| 28 Apr 2009 | MATLAB Programming Example for U2300A Modular USB Data Acquisition (DAQ) module’s Analog Output This program sets the USB DAQ module to output a continuous sine wave. | 145 | 0 | |||
| 15 Apr 2009 | MATLAB Adaptor for Agilent's U2600A Series USB Data Acquisition Devices (DAQ) This enables you to use MATLAB and MATLAB’s Data Acquisition Toolbox with U2600A Series DAQ devices. | 94 | 0 | |||
| 15 Apr 2009 | MATLAB Adaptor for Agilent's U2500A Series USB Data Acquisition (DAQ) Devices This enables you to use MATLAB and MATLAB’s Data Acquisition Toolbox with U2500A Series DAQ devices | 97 | 0 | |||
| 15 Apr 2009 | MATLAB Adaptor for U2300A Series USB Data Acquisition Devices (DAQ) & U2802A Signal Conditioner This enables you to use MATLAB and MATLAB’s Data Acquisition Toolbox with U2300A Series DAQ devices. | 102 | 0 | |||
| 31 Mar 2009 |
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HWtest Test if a locus is under Hardy Weinberg Proportion | 105 | 1 | ||
| 18 Mar 2009 |
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Toward a program development and documentation toolbox ...offering important and structured complements to Edit/debug, & Mlint | 74 | 2 | ||
| 07 Mar 2009 | FCS data reader Read FCS 2.0 and FCS 3.0 format flow cytometry files | 182 | 4 | |||
| 04 Mar 2009 | intersect sets Intersection of two sets of positive integers (works much faster than built-in intersect) | 20 | 0 | |||
| 29 Dec 2008 | Fisher’s Exact Test Hypergeometric cumulative distribution (left, right and two-tailed) including permutation testing. | 64 | 0 | |||
| 17 Dec 2008 |
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Java Web Example Guide End To End Chapter This is the source files for the example discussed in the Java Web Example Guide End To End Chapter | 40 | 1 | ||
| 03 Dec 2008 |
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Reads an IPL (IPLab) file and returns images it contains. Reads an IPL (IPLab) file and returns images and meta-data it contains in cell structures. | 15 | 1 | ||
| 25 Nov 2008 |
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Gait Extract Toolbox Toolbox for extracting motion capture and force plate data from c3d files. Used for pre processing d | 44 | 0 | ||
| 23 Nov 2008 |
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Taxi - movement of bacteria to the food Friendly user-interface simulating the chemo-taxis movement of biological systems | 24 | 1 | ||
| 12 Nov 2008 | PCRefficiency Set the Efficiency of a RT-PCR to use in the relative quantification of transcripts. | 97 | 0 | |||
| 12 Nov 2008 | DNAtranslator Convert a DNA sequence in an amino acids sequence | 107 | 0 | |||
| 03 Nov 2008 |
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Fractal visualisation of genomic sequences Visualise n-mer nucleotide sequences using a fractal visualisation based on a Sierpinski gasket. | 24 | 0 | ||
| 22 Oct 2008 | simulink realization of Morris-Lecar neuron model simulink realization of Morris-Lecar neuron model | 26 | 0 | |||
| 17 Oct 2008 |
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Two-Syringe MED Perfusion System Instructions and m-files for setting up a remote-controlled multielectrode dish perfusion system. | 10 | 0 | ||
| 11 Aug 2008 | SimBiology Tutorial, presented at q-bio conference Modeling and simulation of biochemical networks. This was a SimBiology tutorial presented at the q-b | 22 | 0 | |||
| 22 Jul 2008 |
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Flex99OEM-12C Correlator Interface A graphical user interface to the Flex99OEM-12C hardware correlator accessing the Windows driver. | 107 | 0 | ||
| 25 Jun 2008 |
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SimBiology Tutorial Files used in Online SimBiology Tutorial | 26 | 0 | ||
| 02 Jun 2008 | Blood Glucose Model for Insulin Control A blood glucose model of type-1 diabetics. | 20 | 2 | |||
| 29 Apr 2008 |
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Primer Design Tool Finds potential primers for DNA sequencing | 18 | 1 | ||
| 22 Apr 2008 |
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Hodgkin-Huxley Model This is a simulation of Hodgkin-Huxley equations using simulink blocks. | 88 | 0 | ||
| 12 Mar 2008 | sigmoid creates a Sigmoid function using parameters | 54 | 2 | |||
| 19 Feb 2008 |
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Nodose neuron action potential firing. Model of action potential firing by an A-type nodose neuron | 35 | 2 | ||
| 11 Feb 2008 |
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LCMS Data Overlay GUI Plots a set of 3 traces and identifies significant peaks from Sample that exceed corresponding peaks | 12 | 0 | ||
| 14 Dec 2007 | Systems Biology Tool Box ODE Generator Utility to generate ODEs from and xml file generated by sbiodesktop | 18 | 1 | |||
| 03 Dec 2007 |
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Modeling Lung Cancer Diagnosis Using Bayesian Network Inference Pearl's message passing algorithm implementation and application to lung cancer diagnosis | 54 | 1 | ||
| 17 Oct 2007 |
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virtualPCR v0.6 This little program generates real-time PCR plots based all important real-time PCR parameters. | 16 | 0 | ||
| 10 Sep 2007 |
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Yeast Fermentation Bioreactor for Ethanol Production First principles dynamic simulator of a yeast fermentation bioreactor for ethanol production. | 35 | 6 | ||
| 18 Aug 2007 |
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Taxonomic Annotation of BLAST Reports Annotate BLAST reports with taxonomic information | 8 | 0 | ||
| 13 Aug 2007 | EMBLRead A modified version of EMBLRead for Reading a EMBL file into a Matlab structure much faster | 11 | 0 | |||
| 03 May 2007 | Simulation of Error Negativite Response (Human Brain) Simulation of ERn driven behavioural response to a more probable/less probable rewarded chioce test | 8 | 1 | |||
| 19 Apr 2007 | mRMR Feature Selection (using mutual information computation) This is a cross-platform version of mimimum-redundancy maximum-relevancy feature selection | 102 | 7 | |||
| 13 Apr 2007 |
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plotphytree PLOTPHYTREE(TREE) renders a phylogenetic tree object into a MATLAB figure as a phylogram. | 11 | 0 | ||
| 30 Jan 2007 |
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Developing Pharmacokinetic and Pharmacodynamic Models in Simulink Models that represent subsystems as graphical blocks rather than as complex differential equations. | 174 | 0 | ||
| 17 Jan 2007 |
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Quantitative High-Throughput Gene Expression Imaging Image Processing for Quantitative Gene Expression Analysis of Drosophila Embryo Images | 27 | 4 | ||
| 18 Dec 2006 |
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Nonlinear Fit of Michaelis-Menten model Computes Michaelis-Menten model parameters | 16 | 1 | ||
| 02 Oct 2006 |
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dbSNP tool GUI for the retrieval of single nucleotide polymorphism data from dbSNP | 19 | 0 | ||
| 20 Sep 2006 |
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gethgvbase Extraction of single nucleotide polymorphism data from HGVBASE | 22 | 0 | ||
| 14 Sep 2006 | MATLAB for Bioinformatics PowerPoint presentation from the MATLAB for Bioinformatics webinar. | 20 | 7 | |||
| 22 Aug 2006 | Collateral Missing Value Estimation: a new robust missing value estimation algorithm for microarray The toolbox can be used for missing value estimation | 20 | 0 | |||
| 09 Aug 2006 |
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Accessing Mass spectrometry data using the Proteome Commons IO Library Shows how to load many types of mass spectrometry data. | 24 | 1 | ||
| 21 Jun 2006 |
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Working with Large Biological Datasets in MATLAB Slides and files for Webinar on handling large biological datasets | 17 | 1 | ||
| 26 May 2006 |
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fca 2.2 Flow cytometric analysis GUI. | 158 | 1 | ||
| 11 May 2006 | General Viterbi Algorithm This function runs Viterbi algorithm given valid parameters and returns optimal path into a file (ou | 140 | 8 | |||
| 14 Mar 2006 | Web Deployment Using MATLAB Builder For .NET A web-based gene analysis demonstration using MATLAB Builder for .NET | 32 | 3 | |||
| 03 Mar 2006 |
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SeldiTool A GUI for mass spectrometry data analysis | 16 | 0 | ||
| 21 Dec 2005 | Web Deployment Using MATLAB A web-based gene analysis demonstration using MATLAB Builder for COM | 21 | 0 | |||
| 05 Dec 2005 |
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Monte Carlo Simulation for Photon Migration Inside Biological Tissue (version 1.2) A MATLAB implementation of Monte Carlo simulation for photon migration inside tissue. | 23 | 4 | ||
| 19 Oct 2005 |
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Monte Carlo Simulation for Photon Migration Inside Biological Tissue A MATLAB implementation of Monte Carlo simulation for photon migration inside tissue. | 21 | 5 | ||
| 07 Sep 2005 |
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Flow Cytometry Data Reader and Visualization Flow Cytometry Data Reader and Visualization Example | 33 | 1 | ||
| 23 Aug 2005 |
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Michi Shape Plotter Simple script to recover and plot Neurolucida files and outputs from "Michi Tracer". | 10 | 0 | ||
| 23 Aug 2005 |
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Michi Tracer Very basic Neurolucida-like system without microscope and for 2D cultured cells. | 10 | 1 | ||
| 03 Aug 2005 |
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Improved GUI for Affymetrix gene expression analysis Log transform, Log ratio, Normalization, Filtering, Visualization, Noise reduction, PCA, Clustering | 13 | 5 | ||
| 18 Apr 2005 | Thermal reduction time Calculate decimal reduction time. | 13 | 0 | |||
| 11 Apr 2005 | SCF writer Writes SCF formatted files. | 28 | 0 | |||
| 01 Apr 2005 | Absolute and Comparison Analysis for Affymetrix Data Perform single-array and comparison analysis for Affymetrix data given by CEL and CDF files ... | 17 | 0 | |||
| 04 Mar 2005 |
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GUI for Basic Local Alignment Search Tool (BLAST) Allows users to perform NCBI BLAST on local machine, graphically. | 22 | 3 | ||
| 07 Jan 2005 | renamedicom Renames Dicom Images with Sequential Alpha Numeric Nomenclature. | 15 | 0 | |||
| 09 Dec 2004 |
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Gene Expression Colormap Returns a colormap for visualizing gene expression. | 19 | 3 | ||
| 12 Aug 2004 |
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DNA MicroArray Image Processing Case Study Case study used in Biomedical and Image Processing seminars (highlights algorithm development). | 134 | 11 | ||
| 02 Jun 2004 | MDAT Microarray analysis. | 15 | 0 | |||
| 01 Jun 2004 |
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PHYLIP DNA parsimony (dnapars) GUI GUI for DNA parsimony algorithm in PHYLIP 3.6. | 13 | 0 | ||
| 14 Jan 2004 | dose_response Function to fit a dose-response data to a 4 parameter dose-response curve. | 12 | 2 | |||
| 06 May 2003 | MetMAP A MATLAB package for metabolical modeling, analysis and optimization. | 17 | 1 | |||
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