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updated 18 days ago

MIT-LCP/wfdb-app-toolbox by Ikaro Silva

A collection of MATLAB/Octave functions for reading and processing physiological time series. (ecg, ekg, eeg)

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updated 20 days ago

Mass Univariate ERP Toolbox by David Groppe

Functions for performing and visualizing mass univariate analyses of event-related potentials. (multiple comparisons, tmax, toolbox)

gui_erp.m

save_matmk.m

GNDs2GRP(gui_infiles_or_tmplt,varargin)

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updated 6 months ago

Time Series Indexing by W. Owen Brimijoin

Outputs means of a time series given a vector of labels and time stamps (time series, array, matrices)

timeseries_indexer(labels,timestamps,win,data)

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updated 6 months ago

edfread2 by Matt Fifer

This is a modification of the "edfread" submission, modified to be faster with less options. (eeg, ekg, ecog)

edfread2(fname)

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updated 6 months ago

Automated EEG Repair Tool by Kristjan-Julius

Automatically detects and repairs EEG data that is noisy or contains artifacts (eeg, interpolation, automatic)

coreEXE( cfg, data )

defineBadNeigh( cfg, eeg_data )

detectionAlgorithm( prestim, freq, eeg_data )

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updated 8 months ago

BlockEdfSignalRasterView by Dennis A. Dean, II, Ph.D.

Utility for viewing EDF headers and signals (european data format, edf, utility)

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updated 8 months ago

BlockEdfHeatMapView by Dennis A. Dean, II, Ph.D.

Create a heatmap from signals stored in an EDF file (european data format, edf, eeg)

blockEdfLoad.m

testBlockEdfHeatMapView.m

BlockEdfHeatMapView.m

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updated 8 months ago

BlockEdfSignalRasterView by Dennis A. Dean, II, Ph.D.

Create a raster plot from signals stored in an EDF file (eurpean data format, edf, raster plot)

blockEdfLoad.m

testBlockEdfSignalRasterView.m

BlockEdfSignalRasterView.m

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updated 8 months ago

BlockEdfWrite by Dennis A. Dean, II, Ph.D.

A function for creating an EDF file (european data format, edf, write)

blockEdfLoad.m

blockEdfWrite.m

testBlockEdfWrite.m

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updated 11 months ago

blockEdfLoad by Dennis A. Dean, II, Ph.D.

A flexible EDF file loader for accessing header information and signal data. (edf, european data format, eeg)

blockEdfLoad.m

testBlockEdfLoadDistribution.m

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updated 1 year ago

bdf_ChanOps by Chris Bishop

Function to read in, write, and perform any mathematical operation on BDFs. (bdf, biosemi, eeg)

[HDR, HEADER, HEADEROUT, DATA]=bdf_ChanOps(IN, OUT, CHANO...

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updated 1 year ago

Matlab to EDF Conversion by Rajeev Yadav

This is a simple GUI to allow easy conversion of MAT files to EDF. It is based on BioSig Toolbox. (eeg, mat, edf)

EDFCreator(varargin)

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updated 1 year ago

Empirical orthogonal function (PCA) estimation for EEG time series by DaveA Albers

Empirical orthogonal function (PCA) estimation for EEG time series (signal processing, statistics, data exploration)

distinguishable_colors(n_colors,bg,func)

distinguishable_colors(n_colors,bg,func)

eof_unlimited_time(x, N, T, number_of_measurements_per_bl...

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updated 1 year ago

Neural Data Toolbox (NDTb) by Lukas Maly

Neural Data Toolbox (NDTb) is toolbox developed for neuroscience data processing. (neural data toolbox, ndtb, fmri)

ndtb.m

ndtb_3dviz_gui.m

ndtb_anon_gui.m

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updated 1 year ago

Reading and saving of data in the EDF+ by Andrey Shapkin

Reading and saving of multichannel biological and physical signals in the European Data Format (EDF) (edf, eeg, save)

ReadEDF.m

SaveEDF.m

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updated 1 year ago

eegplot by Ikaro Silva

Uses scattered data points to interpolate pixel values of a head image. (medical, eeg, interpolation)

[z,map]=eegplot(mag,ch,unorm,ch_disp,method,color_res)

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updated 1 year ago

Time-frequency coherency by Tjeerd

Computes the complex-valued time-frequency coherency between two signal vectors (signal processing, timefrequency analysi..., coherence)

tfcohf(x,y,nfft,spec_win,sm_win,tstep,fs)

tfcohf2(x,y,nfft,spec_win,tstep,fs)

tfcohf3(x,y,nfft,spec_win,sm_win1, sm_win2,tstep,fs)

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updated almost 2 years ago

COMPLETE HIGUCHI FRACTAL DIMENSION ALGORITHM by Salai Selvam V

MATLAB code for Higuchi Fractal Dimension (higuchi fractal dimen..., chaos, nonlinear dynamics)

[varargout]=wsc(N,lamda,M,H)

xhfd=hfd(x,kmax)

try.m

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updated 2 years ago

bag-of-words representation for biomedical time series classificaiton by Jin

a simple yet effective bag-of-words representation for biomedical time series, such as EEG and ECG. (bag of words, eeg, ecg)

do_form_codebook(config_file)

do_representation(config_file)

do_vq(config_file)

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updated 2 years ago

Electrocorticography / intracranial EEG visualizer by Matthew Davidson

This is a tool for plotting iEEG/ECog data on a brain. (ieeg, ecog, visualization)

ft_group_ieeg_elec_plot(varargin)

keeponly_electrodes(elec, wh)

plot_brain(surf_brain, viewpoint, varargin)

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updated almost 3 years ago

DAQ Recoder by duk

This program developed to record AI signals like EEG or EMG. Almost NI Card was supported. (ni card, usb, ai)

DAQ_Recoder(varargin)

daq2mat(fname)

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updated 3 years ago

erp_reject by Luca Citi

Rejection of outlier trials from Event-Related Potential (ERP) studies (signal processing, medical, statistics)

erp_reject(erp, baseline_int, strip_g, out_max)

test_erp_reject.m

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updated 3 years ago

Matching pursuit for 1D signals by Patrick Mineault

Performs Matching Pursuit on 1d (temporal) signals with custom basis (matching pursuit, basis pursuit, temporal signal)

temporalMP(y,B,nonnegative,maxiter,mindelta,deadzone)

TryTemporalMP.m

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updated 3 years ago

Connected topoplot by Praneeth Namburi

Visualize networks in your EEG data (eeg, visualization, network)

Connected Topoplot

topoplot_connect(displayStruct, loc_file)

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updated 3 years ago

Phase Locking Value by Praneeth Namburi

Computes the Phase Locking Value (PLV) for neuroelectric signals. (eeg, ecog, plv)

pn_eegPLV.m

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updated almost 4 years ago

Load BIOPAC ACQ (AcqKnowledge for PC) data by Jimmy Shen

Load BIOPAC's *.acq file (AcqKnowledge for Windows data format). (medical, biopac acqknowledge, acq)

load_acq(filename, chan_by_chan)

acq2mat.m

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updated 4 years ago

Biomed Reader + Video Reader by Guillaume Becq

Read Micromed EEG/video files, Trident, EDF and txt files Read Video files with activeX WMP (biomedical, medical, eeg)

BiomedReader()

BiomedReaderCHUG(varargin)

BiomedReaderCommand(varargin)

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updated almost 6 years ago

Find Clipped Trials by Matthew Nelson

Find trial indices in which "clipping" occurred for recorded analog data in a trials format (neuroscience, psychology, trials)

ClipTrs=FindClipTrs(curADMat,nConsecSampCutoff)

getchunks(a, opt)

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updated almost 6 years ago

Common Spatial Patterns by JLRowan LaRocco

An early version a common spatial patterns (CSP) algorithm. (signal processing, bci, bmi)

CSP(varargin)

spatFilt(x, coef, dimm)

CSPTest.m

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updated almost 7 years ago

RAAA EOG Correction Program by Tony

Correct, and plot the data recorded by the EEG from corruption of EOG (medical, eog, eeg)

chselect(varargin)

keep(varargin)

main(varargin)

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updated 7 years ago

EEG bdf reader by Gleb Tcheslavski

This code reads EEG data from a 'bdf' file (medical, eeg, bdf)

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