image thumbnail

updated 7 days ago

Raster Image Correlation Spectroscopy by Molly Rossow

Performs raster image correlation analysis spectroscopy (RICS) (image analysis, microscopy, fluorescence)

image thumbnail

updated 11 days ago

Blobdetection for Bloodflow Estimation by Julie

algorithm for Fluorescent microsphere detection (microsphere, blobdetection, image processing)

BlobFunct(im,plotopt)

RGBcheck(im,blobs,color)

areal_est(im)

image thumbnail

updated 3 months ago

Hyperspectral CARS Image Analysis by Rajeev Yadav

Hyperspectral CARS microscopy and spectroscopy toolbox (cars microscopy, microscopy, image processing)

HSIStack(varargin)

ProcessStack3DMatrix(NewStack)

gammacorrection(Image,GammaValue)

image thumbnail

updated almost 2 years ago

Filter noise and interpolate microscopy images in frequency domain by Shalin Mehta

Remove spatial frequencies beyond the optical cutoff and perform physically accurate interpolation. (microscopy, filtering, interpolation)

[out,outscale]=opticalLowpassInterpolation(in,inscale,fcu...

y=jinc(r)

TestBench_opticalLowpassInterpolation_Airy.m

image thumbnail

updated 2 years ago

Vessel branch segmentation by Hiroshi Kawaguchi

Segment the vessel branches from dynamic image of fluorescent microscopy (image processing, gui, microscopy)

VesselBranchSegmentation

[appTime, mask]=VBSvesselMask(vimg)

[map sepTime]=VBSregionMerge(appTimeImg)

image thumbnail

updated 2 years ago

Leica image format file loader by Hiroshi Kawaguchi

Read and preview of Leica's image format file. (gui, file format, microscopy)

HKloadLif.m

image thumbnail

updated 3 years ago

GUI: Radial Distribution Function by Sourav Chatterjee

Lets the user manually identify centers/dots in an input image, and calculates the RDF (measurement, statistics, image processing)

Rad_Dist_Func(varargin)

[rbin]=rdfcalc(C,xlim,ylim)

[theta]=checkquad(x1,y1,rvec,dim,xlim,ylim)

image thumbnail

updated almost 4 years ago

FRETSCAL by Eric Muller

For the FRET analysis of images of yeast cells labeled with YFP and CFP. (microscopy, yeast, fluorescence resonanc...)

batch

brightpatch

cull_callback

image thumbnail

updated 5 years ago

Live Intensity Plot by Peter

Reads images from liveCam, measures intensity in selected region and writes data + movie to file (live intensity plot, imaga acquisition, thin films)

ThinFilms(varargin)

image thumbnail

updated 5 years ago

Image Section Generator by Alison Chaiken

Image Section Generator grabs cursor-designated linescans from microscope images (gui, image processing, microscopy)

CheckForExistingFile( OutFileName )

EnforceBounds(InputVector,InputHandles)

ImageSectionGenerator(varargin)

Contact us