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Tyler

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28 Jun 2011 Tools for NIfTI and ANALYZE image Load, save, make, reslice, view (and edit) both NIfTI and ANALYZE data on any platform Author: Jimmy Shen

I downloaded the new program, so I now get a different error suggesting what you just mentioned.

However, reslicing is not an option, as we were using SPM to register images in the first place, so we need the NIFTIs in the current space they are in (I will work on getting images to you, but I don't know if that is a possibility at this point).

28 Jun 2011 Tools for NIfTI and ANALYZE image Load, save, make, reslice, view (and edit) both NIfTI and ANALYZE data on any platform Author: Jimmy Shen

Edit: error here

load_nii(pathTo.imgFile)
**??? Error using ==> xform_nii>change_hdr at 236
Transform of this NIFTI data is not supported by the
program**.

Error in ==> xform_nii at 90
[hdr orient] = change_hdr(hdr);

Error in ==> load_nii at 71
nii = xform_nii(nii);

28 Jun 2011 Tools for NIfTI and ANALYZE image Load, save, make, reslice, view (and edit) both NIfTI and ANALYZE data on any platform Author: Jimmy Shen

Mr Shen,

I have had good success in general with this package; however, in dealing with SPM NIFTIs (http://www.fil.ion.ucl.ac.uk/spm/) I cannot load with load_nii.

I must use load_untouch_nii, however, when I use this, the NIFTIs are in a random spatial orientation, with the image matrix needing to be flipped and/or rotated to be in correct orientation.

Do you know a way to fix this?? It is greatly slowing my research :/

Thanks!

Tyler

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