Cengiz Gunay

Is the idea of 'precision' implemented in your assert functions? Andrei Rotenstein above suggested it.

I also came up with my own assert case for checking the 'maximal' error during a vector comparison; e.g.,

assert(max(abs(m_int - m_ideal)) < 1e-1);

It would be nice to have it implemented inside assertElementsAlmost Equal. A shorter name for the function would also make test functions clearer ;)

Otherwise this is a simple and great framework. Thanks!

I am getting this error with some ABF2 files from pClamp10:

>> Kslow1_vc = abf2voltage_clamp([ Kfastslow_datadir '008/09821026.abf' ]);
** abf2load
opening ~/prinzlab/Logy/Data Compilation/Potassium Data/Subtracted/008/09821026.abf..
{??? Index exceeds matrix dimensions.

Error in ==> abf2load at 291
   h.recChNames=strvcat(h.recChNames, Strings{ADCsec(i).lADCChannelNameIndex});
...
}
291 h.recChNames=strvcat(h.recChNames, Strings{ADCsec(i).lADCChannelNameIndex});
K>>
K>> ADCsec(i).lADCChannelNameIndex

ans =

       64265

There are only about 7000 Strings, so this is way out of bounds. I also tried the python version of abf2load that is part of Neo, but that chokes on these files, too. I can send a copy of the file if you can take a look at it.

Thanks for the otherwise very useful utility!

(molecular devices developer page link is broken now. Is there a way to get to that code?)