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Comments and Ratings by Nicole
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27 Mar 2013 Flow Cytometry GUI for Matlab This GUI was built in order to make Flow Cytometry data analyses in Matlab – gating, statistics etc. Author: Nitai Steinberg

This is an excellent flow cytometry toolkit/gui for matlab. What I like most about this plug-in is the fact that I don't have to be a matlab master to use it. I hope you continue to develop it since it has a lot of potential.

- There are some path issues in using this plugin on a Windows installation of matlab involving \ vs /. Once repaired, the software works as advertised. (I fixed it awhile ago on my copy, so I fear I've forgotten which files are affected. But at the very least, do a search for "private/rorschach.mat" in FCGUImain.m and change to "private\rorschach.mat" if you have a Windows machine. I seem to remember at least one other file needs a similarly trivial change.)

Feature Requests:
- As you said in "open issues," implementing a logicile/biexponential display would be very beneficial.
- When I try to make a multiple plot figure of 2D histograms, and set them to have the same x/y scale (i.e. 1:1), the little log scale tick marks don't follow suit. I end up deleting them by hand.
- While I can clearly see how to make a multiple plot of several different files, using the same dyes for their x and y axes, I don't see how to make a multiplot of the same file using different dyes for the x and y axes.

Thank you for your hard work on this plug in.

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