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Comments and Ratings by Anne-Lene View all
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26 Jan 2010 Tools for NIfTI and ANALYZE image Load, save, make, reslice, view (and edit) both NIfTI and ANALYZE data on any platform Author: Jimmy Shen

I have looked at those links and tried expand_nii_scan, and I'm afraid I still don't understand. My file has the nii extension and when I use expand I get another nii file, I don't see the difference between that and my original file, when I use view_nii.

I saw that using make_nii I could convert images with the img/hdr extension, but I couldn't get it to work on my file with nii extension.

Anne-Lene

25 Jan 2010 Tools for NIfTI and ANALYZE image Load, save, make, reslice, view (and edit) both NIfTI and ANALYZE data on any platform Author: Jimmy Shen

Hi!

I am a beginner in using nifti so this may seem like a stupid question, but i hope you can help me.

I have used fsl prelude to unwrap my mri images, and they are now in the nifti format. I now need to compare these to images with images that I have unwrapped with a matlab algoritm that i made myself.

Can i use your tools to look at the nifti images separatley and perhaps convert them to another datatype that i can use in matlab?

I tought maybe your tip in the help save_nii could help me, but i don't see how to use it, do i need img/hdr files instead of nii?

I will be very greatful for some guidance.

Anne-Lene

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