Refine by Content Type

Refine by Product

Refine by Time Frame

image thumbnail

updated 9 months ago

2d and 3d brain plots by Jeremy Manning

Quickly and easily create 2d and 3d plots of fMRI data. (fmri, pcolor, 2d)

PATCH_3Darray(varargin)

cmu_to_mat(data, meta)

construct_meta(dims)

image thumbnail

updated 1 year ago

SPM NeuroSynth scraper by Drew Linsley

Scrape activation information from NeuroSynth.org for SPM8 first- or second-level results. (spm, neuroimaging, fmri)

spm_mongo_neurosynth(varargin)

image thumbnail

updated 1 year ago

Generate synthetic fMRI data by Jeremy Manning

This program is useful for debugging fMRI analyses and models. (fmri, brain, generate)

generate_data(meta,X,SNR,TR,sim_hemodynamics,outfile,vara...

make_nii(varargin)

save_nii(nii, fileprefix, old_RGB)

image thumbnail

updated 1 year ago

Neural Data Toolbox (NDTb) by Lukas Maly

Neural Data Toolbox (NDTb) is toolbox developed for neuroscience data processing. (neural data toolbox, ndtb, fmri)

ndtb.m

ndtb_3dviz_gui.m

ndtb_anon_gui.m

image thumbnail

updated 1 year ago

Brain Message v 1.0 to write secret messages into fMRI by Vanessa

Write secret messages in fMRI data to be uncovered with independent component analysis (fmri, ica, independent component...)

BrainMessage(message,outname)

image thumbnail

updated 2 years ago

Dynamic non-local means (DNLM) for denoising of dynamic medical image sequences by Yaniv

Effective and robust denoising for 4D medical images (e.g. DCE-MRI, fMRI, dynamic PET) (noise, denoising, medical images)

dnlm.m

estimate_noise_dwt(img, Wname)

image thumbnail

updated 2 years ago

slices by Jeremy Manning

Slice a tensor (n-d matrix) along the d^th dimension. (repmat, cellfun, arrayfun)

slices(m,d)

image thumbnail

updated 3 years ago

create_mosaic.m by Simon Robinson

create_mosiac.m - Create tiled "mosaic" images from volumes (mri, fmri, nifti)

centre_and_save_nii(image_nii, filename, pixdim)

centre_header(nii_hdr)

load_nii(filename, img_idx, dim5_idx, dim6_idx, dim7_idx,...

image thumbnail

updated 4 years ago

xjView, viewing program for SPM2 and SPM5 by Xu Cui

p-value slider, single-click to get anatomical description (imaging, mri, spm)

xjview(varargin)

image thumbnail

updated 4 years ago

MRI 3D interactive viwer by Ibraheem Al-Dhamari

Read and View ANALYZE images format. (mri, fmri, analyze)

MRIViewerB(varargin)

image thumbnail

updated 4 years ago

IPN tools for Test-Retest Reliability Analysis by Xi-Nian Zuo

This is one part of my IPN toolbox, aiming at the reliability analysis of neuroimaging meaures. (probability, icc, ccc)

image thumbnail

updated almost 10 years ago

Simple Single-run fMRI Analysis by Temu Gautama

The Bear necessities of a single-run fMRI analysis (medical, fmri, ols)

image thumbnail

updated 11 years ago

readanalyze.m by Colin Humphries

Read MRI files in the Analyze format. (data import, data export, fmri)

readanalyze(filename)

Contact us