DNA MicroArray Image Processing Case Study by Robert Bemis

Case study used in Biomedical and Image Processing seminars (highlights algorithm development). (biotech, intensity, segment spot)

Microarray Spot Finding Example

[x,y]=limits(a)

r=range(x)

Integrate (wrapper for dealing with infinite bounds) by AS

A wrapper for quad to deal with inf bounds. (integration, integrate, improper integral)

integrate(func, lb, ub, intfunction)

mcint by Lee Ferchoff

Monte Carlo integrator over arbitrary n-dimensional domains (integration, monte carlo, integrator)

jacobian(x, system)

learnmcint

mcint(h, n, opt)

gaussq by Per A. Brodtkorb

Numerically evaluates a integral using a Gauss quadrature. (integration, gauss, quadrature)

[bp,wf]=qrule(n,wfun,alpha,beta)

gaussq(fun,A,B,tol,trace,varargin)

rkn86 by Charalampos Tsitouras

Solves numerically a system of ODEs of the form d^2 y/ dx^2=f(x,y). (differential equation..., rungekuttanystrom, mathematics)

rkn86(FunFcn, t0, tfinal, y0, dy0, tol);