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updated 1 month ago

Control ZEN Imaging Software from MATLAB by Sebastian

This appnote shows how to establish a bridge between the ZEN Blue Imaging Software and MATLAB. (automation, communications, data import)


CountObjectsSimple(img, show)

DisplayObjectNumbers(numObjects, segimage, show)

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updated 8 months ago

Image Measurement Utility by Jan Neggers

Interactive tool allowing the measurement of distances, radii, and angles in images (image processing, measurement, microscope)

Image Measurement Utility


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updated 2 years ago

Prairie Technologies MATLAB Toolbox by BruceCorliss

Small collection of functions for interfacing with confocal microscopes made by Prairie Technologies (prairie technologies, microscope, automation)


prairieView_Com(cmd_str, varargin)

prairieView_ExportCoordFile(coord_path, xyz_loc)

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updated 3 years ago

Widefield Fluorescence Microscope point-spread function by Praveen Pankajakshan

Generate the point-spread function for a widefield fluorescence microscope (pointspread function, deconvolution, 3d)

maxintensityproj(I, ndir)

wfmpsf(lambdaEx, lambdaEm, numAper, magObj, rindexObj, ...

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updated 7 years ago

LSM File Toolbox by Peter Li

Functions for reading info databases of Zeiss LSM confocal microscope files. (data import, data export, lsm)

channelinforead(fid, lsminf)



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