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updated 28 days ago

ymatsunaga/mdtoolbox by Yasuhiro

Collection of analysis routines for molecular dynamics trajectories of biomolecules (molecular dynamics, analysis, statistics)

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updated 3 months ago

water gro file creation/generator in MATLAB by Sumith YD

gromacs *.gro file creator for a rectangular block of water (gromacs, gro file, water)


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updated 2 years ago

Rapidly find the points lying inside a cut-off radius by sunil anandatheertha

This completely vectorized code helps you find all points within a cut-off radius from given point. (molecular dynamics, molecular mechanics, nanotechnology)



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updated 5 years ago

Neighborlist building routine for molecular dynamics by Wenzhe Shan

This routine returns interaction pairs for a given set of atoms in 3D space. (simulation, molecular dynamics)

md_neighlist_cube( ...

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