Find an ungapped pattern window from a set of protein sequences by Xugang Ye

This program is to find an ungapped pattern window of certain width from a set of protein sequences (bioinformatics, machine learning, dirichlet mixture mod...)

gibbs_script_4_1.m

load_DM_1.m

Simple Example of Simulated Annealing Optimization by Francesco Pizzo

Example of developing a hybrid solution (Simulated Annealing + Pattern Search) for a case of study. (optimization, simulated annealing, minimum)

U=energy(Qs,rs,drs,z_s)

Xp=perturbation(X,sigma)

[X f_old]=best_initial(X1,X2,X3,X4)

Global Optimization with MATLAB by Stuart Kozola

Demo files from the 2010 webinar "Global Optimization with MATLAB Products" (direct search, genetic algorithm, global optimization)

Global Minimization of 1D Equation

Springboard for Global Optimization Demos

PlotIterates(x,optimValues,state)

Automated Failure Boundary Mapping by Stuart Kozola

Demo files from July 21, 2009 webinar (statistics, optimization, clustering)

Failure Boundary Identification

Flutter Model Demo

boundaryArea(Y,X,lb,ub,limitFunction)

Tips & Tricks: Getting started using optimization with MATLAB by Stuart Kozola

Demo files from the August 21, 2008 Webinar (optimization, simulated annealing, nonlinear optimizatio...)

Optimization Tips Tricks

VEMap(x,RPM,Pratio,VE)

VEPlot(x,optimValues,state)

Optimization of a Double Wishbone Suspension System by Stuart Kozola

Demo files from the Webinar "Introduction to Optimization with MATLAB(R) Products" Oct. 26, 2006 (pattern search, simulink, genetic algorithms)

importfile(fileToRead1,varargin)

updatePlot(varargin)

verifyInstalled

New Approaches to Constrained Optimization in MATLAB by Rakesh Kumar

M-files accompanying the webinar held on November 05, 2005 (direct search, pattern search, genetic algorithm)

nonSmoothFcn(x)

showNonSmoothFcn(fcn,range)

springConstraints(x,Fo,Fc,delta,G,Nf,a,rho)