From: "Greg Heath" <>
Newsgroups: comp.soft-sys.matlab
Date: Fri, 15 Feb 2013 21:08:06 +0000 (UTC)
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Although f-fold XVAL is a very good and popular way for designing and
testing NNs, there is no MATLAB NNTBX function for doing so. I have 
done it for classification and regression by brute force using do loops. 
Unfortunately, that code is not available since my old computer crashed. 
Nevertheless, the coding was straightforward because random weights 
are automatically assigned when the obsolete functions NEWPR, NEWFIT 
or NEWFF are created. With the current functions FITNET, PATTERNNET 
and FEEDFORWARDNET, you either have to use a separate step with 
CONFIGURE or let the TRAIN function initialize the weights.

I did add a few modifications. With f >=3 partitions there are F =
f*(f-1)/2 ( = 10 for f = 5) ways to choose a holdout nontraining pair for
validation and testing. So, for each of F (=10) nets I trained untill
BOTH holdout set errors were minimized. I then obtained 2 nontraining
estimates for error: The error of holdout2 at the minimum error of
holdout1 and vice versa. Therefore for f = 5, I get 2*F = 20 holdout
error estimates which is a reasonable value for obtaining
min/median/mean/std/max (or even histogram) summary statistics.

However, I did get a query from one statistician who felt that somehow
the multiplication factor of F/f = (f-1) ( = 4 for f=5) is biased. The
factor of f-1 is from the use of  f-1 different validation sets for each
of f test sets. However, the f-1 different validation sets correspond to
f-1 different training sets, so I don't worry about it.

In addition, for each of the F nets you can run Ntrials different weight
initializations. So, for f = 5, Ntrials = 5 you can get F*Ntrials = 100 
error estimates.

With timeseries, preserving order and uniform spacing is essential. I 
have only used f-fold XVAL with f = 3 and either DIVIDEBLOCK or 
DIVIDEINT types of data division. In the latter case the spacing is 
tripled and success will depend on the difference of the significant 
lags of the auto and/or cross correlation functions. The trick of two 
holdout error estimates per net still works. Therefore, you can get 
2*Ntrials error estimates. I can't see any other way to preserve 
order and uniform spacing.

The MATLAB commands

lookfor crossvalidation
lookfor 'cross validation'
lookfor validation

may yield functions from other toolboxes which may be of use. 
However I think the use of 2 holdout nontraining subsets is 
unique to neural network training.

Hope this helps.