AUCNormalizationExample_01.png AUCNormalizationExample_02.png AddCustomTitlesAndLabelsForHeatMapExample_01.png AddCustomTitlesAndLabelsForHeatMapExample_02.png AddCustomTitlesAndLabelsForHeatMapExample_03.png AddCustomTitlesAndLabelsForHeatMapExample_04.png AddNGSDataToGenomicsViewerExample_01.png AddNGSDataToGenomicsViewerExample_02.png AddNGSDataToGenomicsViewerExample_03.png AddNGSDataToGenomicsViewerExample_04.png AddNGSDataToGenomicsViewerExample_05.png AddNGSDataToGenomicsViewerExample_06.png AddNGSDataToGenomicsViewerExample_07.png AddNGSDataToGenomicsViewerExample_08.png AdditivePhylogeneticTreeExample_01.png AdjustBaselineOfMassSpectrometryDataExample_01.png AdjustBaselineOfMassSpectrometryDataExample_02.png AlignQuerySequenceToProfileUsingHMMModelAlignmentExample_01.png AligningAMassSpectrumWithOneReferencePeakExample_01.png AligningAMassSpectrumWithOneReferencePeakExample_02.gif AligningAMassSpectrumWithOneReferencePeakExample_03.png AligningAMassSpectrumWithOneReferencePeakExample_04.png AligningAMassSpectrumWithThreeOrMoreReferencePeaksExample_01.png AligningAMassSpectrumWithThreeOrMoreReferencePeaksExample_02.png AnalysisOfPrionProteinPrPNucleotideSequencesInExample_01.png BuildPhylogeneticTreefromPairwiseDistancesExample_01.png BuildPhylogeneticTreeusingNeighborJoiningMethodExample_01.png CalculatePValuesAndTScoresExample_01.png CalculatePValuesAndTScoresExample_02.png CalculatePValuesAndTScoresExample_03.png CalculateRangeOfGeneExpressionProfilesExample_01.png CalculateVarianceOfGeneExpressionProfilesExample_01.png CompareSequencesUsingSequenceAlignmentAlgorithmsExample_01.png CompareSequencesUsingSequenceAlignmentAlgorithmsExample_02.png CompareSequencesUsingSequenceAlignmentAlgorithmsExample_03.png CompareSequencesUsingSequenceAlignmentAlgorithmsExample_04.png CountAminoAcidsInASequenceExample_01.png CountCodonsInANucleotideSequenceExample_01.png CountNucleotidesInASequenceExample_01.png CountRNASeqReadsWithBiopipelineDesignerExample_01.png CountRNASeqReadsWithBiopipelineDesignerExample_02.png CountRNASeqReadsWithBiopipelineDesignerExample_03.png CountRNASeqReadsWithBiopipelineDesignerExample_04.png CountRNASeqReadsWithBiopipelineDesignerExample_05.png CountRNASeqReadsWithBiopipelineDesignerExample_06.png CountRNASeqReadsWithBiopipelineDesignerExample_07.png CountRNASeqReadsWithBiopipelineDesignerExample_08.png CountRNASeqReadsWithBiopipelineDesignerExample_09.png CountRNASeqReadsWithBiopipelineDesignerExample_10.png CountRNASeqReadsWithBiopipelineDesignerExample_11.png CountRNASeqReadsWithBiopipelineDesignerExample_12.png CreateAPhylogeneticTreeExample_01.png CreateAndSaveBlocksInLibrariesUsingBiopipelineDesignerExample_01.png CreateAndSaveBlocksInLibrariesUsingBiopipelineDesignerExample_02.png CreateAndSaveBlocksInLibrariesUsingBiopipelineDesignerExample_03.png CreateAndSaveBlocksInLibrariesUsingBiopipelineDesignerExample_04.png CreateAndSaveBlocksInLibrariesUsingBiopipelineDesignerExample_05.png CreateAndSaveBlocksInLibrariesUsingBiopipelineDesignerExample_06.png CreateAndSaveBlocksInLibrariesUsingBiopipelineDesignerExample_07.png CreateAndSaveBlocksInLibrariesUsingBiopipelineDesignerExample_08.png CreateQualityControlPlotsForSequenceAndQualityDataExample_01.png CreateQualityControlPlotsForSequenceAndQualityDataExample_02.png CreateQualityControlPlotsForSequenceAndQualityDataExample_03.png CreateQualityControlPlotsForSequenceAndQualityDataExample_04.png CreateQualityControlPlotsForSequenceAndQualityDataExample_05.png CreateSimplePipelineSeqQCPlotExample_01.png CreateVolcanoPlotGeneExpressionsExample_01.png CreateVolcanoPlotGeneExpressionsExample_02.png DifferentialAnalysisOnRNASeqDataUsingBiopipelineDesignerExample_01.png DifferentialAnalysisOnRNASeqDataUsingBiopipelineDesignerExample_02.png DifferentialAnalysisOnRNASeqDataUsingBiopipelineDesignerExample_03.png DifferentialAnalysisOnRNASeqDataUsingBiopipelineDesignerExample_04.png DifferentialAnalysisOnRNASeqDataUsingBiopipelineDesignerExample_05.png DifferentialAnalysisOnRNASeqDataUsingBiopipelineDesignerExample_06.png DifferentialAnalysisOnRNASeqDataUsingBiopipelineDesignerExample_07.png DifferentialAnalysisOnRNASeqDataUsingBiopipelineDesignerExample_08.png DifferentialAnalysisOnRNASeqDataUsingBiopipelineDesignerExample_09.png DifferentialAnalysisOnRNASeqDataUsingBiopipelineDesignerExample_10.png DifferentialAnalysisOnRNASeqDataUsingBiopipelineDesignerExample_11.png DifferentialAnalysisOnRNASeqDataUsingBiopipelineDesignerExample_12.png DifferentialAnalysisOnRNASeqDataUsingBiopipelineDesignerExample_13.png DifferentialAnalysisOnRNASeqDataUsingBiopipelineDesignerExample_14.png DisplayASequenceLogoForAlignedAASeqExample_01.png DisplayBoxPlotsForMicroarrayDataExample_01.png DisplayBoxPlotsForMicroarrayDataExample_02.png DisplayCNVDataAlginedToChromosomeIdeogramExample_01.png DisplayCNVDataAlginedToChromosomeIdeogramExample_02.png DisplaySequenceLogoForNucleotideSeqExample_01.png DisplayTheFrequencyOfCNAExample_01.png DisplayTheFrequencyOfCNAExample_02.png DisplayTheFrequencyOfCNAExample_03.png DisplayTheFrequencyOfCNAExample_04.png DisplayTheFrequencyOfCNAExample_05.png DownloadNGSDataFromSRAExample_01.png DownloadNGSDataFromSRAExample_02.png DownloadNGSDataFromSRAUsingBioinformaticsPipelineExample_01.png DrawRamachandranPlotExample_01.png DrawRamachandranPlotForSpecificChainExample_01.png DrawRamachandranPlotsWithGlycineResiduesAndRegionsExample_01.png DrawRamachandranPlotsWithGlycineResiduesAndRegionsExample_02.png DrawRamachandranPlotsWithGlycineResiduesAndRegionsExample_03.png DrawRamachandranPlotsWithGlycineResiduesAndRegionsExample_04.png EstimateFDRForMultipleHypothesisTestingExample_01.png EstimateIsoelectricPointForAASequenceExample_01.png FindDiscriminantPeaksOfTwoGroupsOfSignalsExample_01.png GenerateSpatialImageForMicroarrayDataExample_01.png GenerateSpatialImageForMicroarrayDataExample_02.png GenerateSpatialImageForMicroarrayDataExample_03.png GenerateSpatialImageForMicroarrayDataExample_04.png GenerateSpatialImageForMicroarrayDataExample_05.png GenerateSpatialImageForMicroarrayDataExample_06.png GetAncestorsOfGeneontObjectExample_01.png GetDescendentsOfGeneontObjectExample_01.png LoadBlockBioinformaticsPipelineExample_01.png MalowessExample_01.png MalowessExample_02.png MaximumIntensityNormalizationExample_01.png NormalizeMicroarrayDataExample_01.png ObtainPeaksListExample_01.png ObtainPeaksListExample_02.png ObtainPeaksListExample_03.png ObtainPeaksListExample_04.png PerformCBSOnCGHDataExample_01.png PerformCBSOnCGHDataExample_02.png PerformCBSOnCGHDataExample_03.png PerformCBSOnCGHDataExample_04.png PerformDifferentialAnalysisOnRNASeqDataExample_01.png PerformDifferentialAnalysisOnRNASeqDataExample_02.png PerformHierarchicalClusteringOnGeneExpressionDataExample_01.png PerformHierarchicalClusteringOnGeneExpressionDataExample_02.png PerformHierarchicalClusteringOnGeneExpressionDataExample_03.png PerformHierarchicalClusteringOnGeneExpressionDataExample_04.png PerformHierarchicalClusteringOnGeneExpressionDataExample_05.png PerformUnpairedHypothesisTestForShortreadCountDataExample_01.png PerformUnpairedHypothesisTestForShortreadCountDataExample_02.png PerformUnpairedHypothesisTestForShortreadCountDataExample_03.png PerformUnpairedHypothesisTestForShortreadCountDataExample_04.png PerformUnpairedHypothesisTestForShortreadCountDataExample_05.png PerformUnpairedHypothesisTestForShortreadCountDataExample_06.png PlotAHeatmapOfDataMatrixExample_01.png PlotAHeatmapOfDataMatrixExample_02.png PlotAHeatmapOfDataMatrixExample_03.png PlotAHeatmapOfDataMatrixExample_04.png PlotASetOfMassSpectraDataExample_01.png PlotChromosomeIdeogramsExample_01.png PlotChromosomeIdeogramsExample_02.png PlotHeatmapsOfMassSpectraDataExample_01.png PlotHeatmapsOfMassSpectraDataExample_02.png PlotHeatmapsOfMassSpectraDataExample_03.png PlotMutatedStructureExample_01.png PlotMutatedStructureExample_02.png PlotSeqQualityDataUsingBiopipelineDesignerExample_01.png PlotSeqQualityDataUsingBiopipelineDesignerExample_02.png PlotSeqQualityDataUsingBiopipelineDesignerExample_03.png PlotSeqQualityDataUsingBiopipelineDesignerExample_04.png PlotSeqQualityDataUsingBiopipelineDesignerExample_05.png PlotSeqQualityDataUsingBiopipelineDesignerExample_06.png PlotSeqQualityDataUsingBiopipelineDesignerExample_07.png PlotSeqQualityDataUsingBiopipelineDesignerExample_08.png PlotSeqQualityDataUsingBiopipelineDesignerExample_09.png PlotSeqQualityDataUsingBiopipelineDesignerExample_10.png PlotSeqQualityDataUsingBiopipelineDesignerExample_11.png PlotSeqQualityDataUsingBiopipelineDesignerExample_12.png PlotSeqQualityDataUsingBiopipelineDesignerExample_13.png PlotSeqQualityDataUsingBiopipelineDesignerExample_14.png PlotSeqQualityDataUsingBiopipelineDesignerExample_15.png PlotSeqQualityDataUsingBiopipelineDesignerExample_16.png PlotSeqQualityDataUsingBiopipelineDesignerExample_17.png PlotSeqQualityDataUsingBiopipelineDesignerExample_18.png PlotSeqQualityDataUsingBiopipelineDesignerExample_19.png PlotSeqQualityDataUsingBiopipelineDesignerExample_20.png PlotSeqQualityDataUsingBiopipelineDesignerExample_21.png PlotSeqQualityDataUsingBiopipelineDesignerExample_22.png PlotSeqQualityDataUsingBiopipelineDesignerExample_23.png PlotSeqQualityDataUsingBiopipelineDesignerExample_24.png PlotSeqQualityDataUsingBiopipelineDesignerExample_25.png PlotStructureInGraphFormatAndColorByPairTypeExample_01.png PlotStructureInMountainFormatAndAddTitleToPlotExample_01.png PlotStructureOfRNASequenceInCircleFormatExample_01.png QuantileNormalizationExample_01.png QuantileNormalizationExample_02.png QuantileNormalizationOverYeastdataMATfileExample_01.png ReadAndPlotMassSpectrumDataFromAJCAMPDXFileInMATLABExample_01.png ReadCytogeneticBandingInformationFromAFileExample_01.png ReadDataFromGPRFileExample_01.png RecoverNonlinearWarpingBetweenTwoSignalsExample_01.png RecoverNonlinearWarpingBetweenTwoSignalsExample_02.png ResampleMassSpectrometryDataExample_01.png ResampleMassSpectrometryDataExample_02.png SearchForRelativesInGeneOntologyExample_01.png SetRefSequenceInGenomicsViewerProgrammaticallyExample_01.png SetRefSequenceInGenomicsViewerProgrammaticallyExample_02.png SmoothMassSpectrometryDataExample_01.png SubclassPipelineBlockExample_01.png UltrametricPhylogeneticTreeExample_01.png UltrametricTreeWithDistancesBtwnBranchesLeavesExample_01.png ViewAMultipleSequenceAlignmentFileExample_01.png ViewAPhylogeneticTreeExample_01.png ViewRelationshipsInGeneontObjectExample_01.png WriteTabDelimitedReportFileFromRamachandranStructureExample_01.png WriteTabDelimitedReportFileFromRamachandranStructureExample_02.png acghhmmdemo_01.png acghhmmdemo_02.png acghhmmdemo_03.png acghhmmdemo_04.png acghhmmdemo_05.png acghhmmdemo_06.png acghhmmdemo_eq01613901785976046100.png acghhmmdemo_eq02275008633568004220.png acghhmmdemo_eq02924019300975248201.png acghhmmdemo_eq06513350351295029563.png acghhmmdemo_eq11828984076562429058.png acghhmmdemo_eq14460123924861304936.png aligndemo_01.png aligndemo_02.png alignscoringdemo_01.png alignscoringdemo_02.png alignsigdemo_01.png alignsigdemo_02.png alignsigdemo_03.png alignsigdemo_04.png alignsigdemo_05.png bacacghdemo_01.png bacacghdemo_02.png bacacghdemo_03.png bacacghdemo_04.png bacacghdemo_05.png bacacghdemo_06.png bacacghdemo_07.png bacacghdemo_08.png bacacghdemo_09.png bacacghdemo_10.png biodistcompdemo_01.png biomemorymapdemo_01.png bioperldemo_01.png birdfludemo_01.png birdfludemo_02.png birdfludemo_03.png birdfludemo_04.png birdfludemo_05.png cancerdetectdemo_01.png cancerdetectdemo_02.png cancerdetectdemo_03.png cancerdetectdemo_04.png cancerdetectdemo_05.png cancerdetectdemo_06.png cancerdetectdemo_07.png cancerdetectdemo_08.png cancerdetectdemo_09.png chipseqpedemo_01.png chipseqpedemo_02.png chipseqpedemo_03.png chipseqpedemo_04.png chipseqpedemo_05.png chipseqpedemo_06.png chipseqpedemo_07.png chipseqpedemo_08.png chipseqpedemo_09.png chipseqpedemo_10.png chipseqpedemo_11.png clustergramdemo_01.png clustergramdemo_02.png clustergramdemo_03.png clustergramdemo_04.png clustergramdemo_05.png clustergramdemo_06.png clustergramdemo_07.png clustergramdemo_a.png clustergramdemo_b.png clustergramdemo_c.png clustergramdemo_d.png clustergramdemo_e.png clustergramdemo_f.png clustergramdemo_g.png clustergramdemo_h.png diffprotdemo_01.png diffprotdemo_02.png diffprotdemo_03.png diffprotdemo_04.png diffprotdemo_05.png diffprotdemo_06.png diffprotdemo_07.png diffprotdemo_08.png diffprotdemo_09.png diffprotdemo_10.png diffprotdemo_11.png diffprotdemo_12.png diffprotdemo_13.png diffprotdemo_14.png diffprotdemo_15.png diffprotdemo_16.png dndsdemo_01.png dndsdemo_02.png dndsdemo_03.png dndsdemo_04.png dndsdemo_05.png dndsdemo_06.png evemotifdemo_01.png evemotifdemo_02.png evemotifdemo_03.png evemotifdemo_04.png function_clustergram_examplestep4.png function_clustergram_examplestep5.png function_clustergram_examplestep5b.png gsedemo_01.png gsedemo_02.png gsedemo_03.png hivdemo_01.png hivdemo_02.png hivdemo_03.png hivdemo_04.png hivdemo_05.png hmmprofdemo_01.png hmmprofdemo_02.png hmmprofdemo_03.png hmmprofdemo_04.png hmmprofdemo_05.png hmmprofdemo_06.png hmmprofdemo_07.png hmmprofdemo_08.png hmmprofdemo_09.png hmmprofdemo_10.png hmmprofdemo_11.png hmmprofdemo_12.png hmmprofdemo_13.png hmmprofdemo_14.png illuminagedemo_01.png illuminagedemo_02.png illuminagedemo_03.png illuminagedemo_04.png illuminagedemo_05.png illuminagedemo_06.png illuminagedemo_07.png illuminagedemo_08.png illuminagedemo_09.png illuminagedemo_10.png ilmnsolexademo_01.png ilmnsolexademo_02.png ilmnsolexademo_03.png ilmnsolexademo_04.png ilmnsolexademo_05.png lcmsdemo_01.png lcmsdemo_02.png lcmsdemo_03.png lcmsdemo_04.png lcmsdemo_05.png lcmsdemo_06.png lcmsdemo_07.png lcmsdemo_08.png lcmsdemo_09.png lcmsdemo_10.png lcmsdemo_11.png lcmsdemo_12.png lcmsdemo_13.png lcmsdemo_14.png lcmsdemo_15.png lcmsdemo_16.png lcmsdemo_17.png mbdseqdemo_01.png mbdseqdemo_02.png mbdseqdemo_03.png mbdseqdemo_04.png mbdseqdemo_05.png mbdseqdemo_06.png mbdseqdemo_07.png mbdseqdemo_08.png mbdseqdemo_09.png metafeaturesdemo_01.png mousedemo_01.png mousedemo_02.png mousedemo_03.png mousedemo_04.png mousedemo_05.png mousedemo_06.png mousedemo_07.png mousedemo_08.png mousedemo_09.png mousedemo_10.png mousedemo_11.png mousedemo_12.png mousedemo_13.png mousedemo_14.png mousedemo_15.png mousedemo_16.png mousedemo_17.png mousedemo_18.png mousedemo_19.png msgademo_01.png msgademo_02.png mspreprodemo_01.png mspreprodemo_02.png mspreprodemo_03.png mspreprodemo_04.png mspreprodemo_05.png mspreprodemo_06.png mspreprodemo_07.png mspreprodemo_08.png mspreprodemo_09.png mspreprodemo_10.png mspreprodemo_11.png mspreprodemo_12.png mspreprodemo_13.png mspreprodemo_14.png mspreprodemo_15.png phybootdistdemo_01.png phybootdistdemo_02.png primatesdemo_01.png primatesdemo_02.png primatesdemo_03.png primatesdemo_04.png primerdemo_01.png primerdemo_02.png primerdemo_03.png primerdemo_04.png rnademo_01.png rnademo_02.png rnademo_03.png rnademo_04.png rnademo_05.png rnademo_06.png rnademo_07.png rnademo_08.png rnademo_09.png rnademo_10.png rnademo_11.png rnaseqdedemo_01.png rnaseqdedemo_02.png rnaseqdedemo_03.png rnaseqdedemo_04.png rnaseqdedemo_05.png rnaseqdedemo_06.png rnaseqdedemo_07.png rnaseqdedemo_08.png rnaseqdedemo_09.png rnaseqdedemo_10.png rnaseqdedemo_11.png secstructnnetdemo_01.png secstructnnetdemo_02.png secstructnnetdemo_03.png secstructnnetdemo_04.png secstructnnetdemo_05.png secstructnnetdemo_06.png secstructnnetdemo_07.png secstructnnetdemo_08.png secstructnnetdemo_09.png secstructnnetdemo_10.png secstructnnetdemo_11.png seqstatsdemo_01.png seqstatsdemo_02.png seqstatsdemo_03.png seqstatsdemo_04.png seqstatsdemo_05.png seqstatsdemo_06.png seqstatsdemo_07.png seqstatsdemo_08.png seqstatsdemo_09.png seqstatsdemo_10.png wholegenomedemo_01.png wholegenomedemo_02.png wholegenomedemo_03.png wholegenomedemo_04.png wholegenomedemo_05.png wholegenomedemo_06.png wholegenomedemo_07.png xxclustergramdemo_a.png xxclustergramdemo_b.png xxclustergramdemo_c.png xxclustergramdemo_d.png xxclustergramdemo_e.png xxclustergramdemo_f.png xxclustergramdemo_g.png xxclustergramdemo_h.png xxfunction_clustergram_examplestep4.png xxfunction_clustergram_examplestep5.png xxfunction_clustergram_examplestep5b.png yeastdemo_01.png yeastdemo_02.png yeastdemo_03.png yeastdemo_04.png yeastdemo_05.png yeastdemo_06.png yeastdemo_07.png yeastdemo_08.png yeastdemo_09.png yeastdemo_10.png yeastdemo_11.png yeastdemo_12.png yeastdemo_13.png