Outputs

Specify species and parameter outputs for sensitivity analysis

Description

Outputs is a property of the SensitivityAnalysisOptions object. SensitivityAnalysisOptions is a property of the configuration set object.

Use Outputs to specify the species and parameters for which you want to compute sensitivities.

The SimBiology^® software calculates sensitivities with respect to the values of the parameters and the initial amounts of the species specified in the Inputs property. When you simulate a model with SensitivityAnalysis enabled in the active configuration set object, sensitivity analysis returns the computed sensitivities of the species and parameters specified in Outputs. For a description of the output, see the SensitivityAnalysisOptions property description.

Characteristics

Applies to	Object: SensitivityAnalysisOptions
Data type	Species or parameter object or array of objects Note If a species or parameter object is determined by a repeated assignment rule, then you cannot use it as an Outputs property.
Data values	Species or parameter object, or an array of objects. Default is [] (empty array).
Access	Read/write

Examples

This example shows how to set Outputs for sensitivity analysis.

1. Import the radio decay model from the SimBiology demos.

   modelObj  = sbmlimport('radiodecay');

2. Retrieve the configuration set object from modelObj.

   configsetObj = getconfigset(modelObj);

3. Add a species to the Outputs property and display it. Use the sbioselect function to retrieve the species object from the model.

   speciesObj = sbioselect(modelObj, 'Type', 'species', 'Name', 'z');
   set(configsetObj.SensitivityAnalysisOptions,'Outputs', speciesObj);
   get(configsetObj.SensitivityAnalysisOptions, 'Outputs')

   SimBiology Species Array
   
   Index:  Compartment:  Name:  InitialAmount: InitialAmountUnits:
     1       unnamed      z        0              molecule