GECKO Toolbox
Version 3.2.2 (26.2 MB) by
Eduard Kerkhoven
Toolbox for including enzyme constraints in a genome-scale model.
Cite As
Eduard Kerkhoven (2024). GECKO Toolbox (https://github.com/SysBioChalmers/GECKO/releases/tag/v3.2.2), GitHub. Retrieved .
Chen, Yu, et al. “Reconstruction, Simulation and Analysis of Enzyme-Constrained Metabolic Models Using GECKO Toolbox 3.0.” Nature Protocols, vol. 19, no. 3, Springer Science and Business Media LLC, Jan. 2024, pp. 629–67, doi:10.1038/s41596-023-00931-7.
MATLAB Release Compatibility
Created with
R2022a
Compatible with R2019b and later releases
Platform Compatibility
Windows macOS LinuxTags
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src/geckomat/change_model
src/geckomat/gather_kcats
src/geckomat/get_enzyme_data
src/geckomat/kcat_sensitivity_analysis
src/geckomat/kcat_sensitivity_analysis/Bayesian
src/geckomat/limit_proteins
src/geckomat/model_adapter
src/geckomat/utilities
test/manual_tests
test/unit_tests
test/unit_tests/ecTestGEM
tutorials/full_ecModel
tutorials/full_ecModel/code
tutorials/light_ecModel
tutorials/light_ecModel/code
To view or report issues in this GitHub add-on, visit the GitHub Repository.
To view or report issues in this GitHub add-on, visit the GitHub Repository.