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version (16.2 KB) by Abigail Reens
Script package for quantifying bacterial load within cells using images from a CV1000 microscope

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Updated 09 May 2018

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This package includes a variety of scripts for analysis of microscopy images, using the SAFIRE screening platform. This package is useful for analyzing high-content screens of intracellular bacteria. The package inputs images from a CV1000 microscope, segments host cells, and quantifies intracellular bacteria. It applies B-score normalization to the resulting data.

Cite As

Abigail Reens (2020). SAFIRE_CV1000 (, MATLAB Central File Exchange. Retrieved .

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MATLAB Release Compatibility
Created with R2016b
Compatible with any release
Platform Compatibility
Windows macOS Linux