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OpenBreast

version 1.0.5 (7.35 MB) by Said Pertuz
Breast image processing

499 Downloads

Updated 03 Aug 2021

From GitHub

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his is a Matlab implementation of different tools for processing digital mammography images developed by Universidad Industrial de Santander. OpenBreast was publicly released in [1] and has been clinically evaluated for the task of breast cancer risk assessment in [2]. The following tasks have been implemented:

* Feature extraction for parenchymal analysis [1]
* Image standardization for (RAW and PROCESSED) digital mammography images
* Breast segmentation and chest wall detection [3]
* Detection of regions on interest within the breast [4,5]
* Breast density segmentation [6]

To get started first run setup.m to configure Openbreast. Then run the following demos:

* demo01 Breast segmentation
* demo02 ST mapping
* demo03 ROI detection
* demo04 Feature extraction on FFDM images
* demo05 Breast density segmentation

For further details, please refer to: https://sites.google.com/view/cvia/openbreast

[1] S. Pertuz et al., Open Framework for Mammography-based Breast Cancer Risk Assessment, IEEE-EMBS International Conference on Biomedical and Health Informatics, 2019.

[2] S. Pertuz et al., Clinical evaluation of a fully-automated parenchymal analysis software for breast cancer risk assessment: A pilot study in a Finnish sample,
European Journal of Radiology: 121, 2019.

[3] B. Keller et al., Estimation of breast percent density in raw and processed full field digital mammography images via adaptive fuzzy c-means clustering and support vector machine segmentation, Med. Phys, 2012.

[4] S. Pertuz, C. Julia, D. Puig, A novel mammography image representation framework with application to image registration, Proc. International Conference on Pattern Recognition, 2014.

[5] G. Torres, S. Pertuz, Automatic Detection of the Retroareolar Region in Mammograms, Proc. Latin American Congress on Biomedical Engineering, 2016

[6] G. F. Torres et al., "Morphological Area Gradient: System-independent Dense Tissue Segmentation in Mammography Images," Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), 2019.

Cite As

Said Pertuz (2021). OpenBreast (https://github.com/spertuz/openbreast), GitHub. Retrieved .

S. Pertuz, G. F. Torres, R. Tamimi, J. Kamarainen, Open Framework for Mammography-based Breast Cancer Risk Assessment, IEEE-EMBS International Conference on Biomedical and Health Informatics, 2019

MATLAB Release Compatibility
Created with R2019a
Compatible with any release
Platform Compatibility
Windows macOS Linux

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To view or report issues in this GitHub add-on, visit the GitHub Repository.
To view or report issues in this GitHub add-on, visit the GitHub Repository.