scGEAToolbox (single-cell Gene Expression Analysis Toolbox)

Single-cell Gene Expression Analysis Toolbox
1.2K Downloads
Updated 21 Nov 2024

Cite As

Cai JJ. scGEAToolbox: a Matlab toolbox for single-cell RNA sequencing data analysis. Bioinformatics. 2019 Nov 7:btz830. doi: 10.1093/bioinformatics/btz830. PMID: 31697351.

MATLAB Release Compatibility
Created with R2024b
Compatible with any release
Platform Compatibility
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Categories
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+gui

+gui/@SplashScreen

+gui/private

+pkg

+pkg/private

+run

+run/external/R_Seurat

+run/external/R_SeuratSaveRds

+run/external/R_clustermole

+run/external/R_scCancer

+run/external/R_scplotter

+run/external/ml_CCPE

+run/external/ml_CSN_transform

+run/external/ml_ComBat

+run/external/ml_GENIE3

+run/external/ml_GENIE3/RT

+run/external/ml_HCP

+run/external/ml_MAGIC

+run/external/ml_McImpute/+mcimpute

+run/external/ml_PHATE

+run/external/ml_SC3/ClusterPack

+run/external/ml_SIMLR

+run/external/ml_SIMLR/src

+run/external/ml_SNNDPC

+run/external/ml_SinNLRR

+run/external/ml_SoptSC

+run/external/ml_SoptSC/NNDSVD

+run/external/ml_SoptSC/symnmf2

+run/external/ml_SoptSC/vinlinplot

+run/external/ml_Specter

+run/external/ml_Specter/LSC

+run/external/ml_Specter/dimred

+run/external/ml_Specter/utils

+run/external/ml_TSEE

+run/external/ml_UMAP44

+run/external/ml_UMAP44/util

+run/external/ml_beyondcell

+run/external/ml_cbrewer

+run/external/ml_scGeneFit

+run/external/ml_scGeneFit/source

+run/external/ml_scGeneFit/source/classification_metrics

+run/external/py_SERGIO

+run/external/py_harmonypy

+run/external/py_writeh5ad

+run/external/web_STRING/stringdb

+run/private

+run/thirdparty/MPPC

+run/thirdparty/alona_panglaodb

+run/thirdparty/alona_panglaodb/msigdb_c8

+run/thirdparty/alona_subtypes

+run/thirdparty/k-NN-code

+run/thirdparty/locfit/Source

+run/thirdparty/locfit/m

+ten

+ten/+xct

@SingleCellExperiment

private

resources/HPA_Single_Cell_Type_Atlas

tensor_toolbox

tensor_toolbox/@ktensor

tensor_toolbox/@tenmat

tensor_toolbox/@tensor

tensor_toolbox/@ttensor

tensor_toolbox/test