Taxi - movement of bacteria to the food

Friendly user-interface simulating the chemo-taxis movement of biological systems
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Updated 23 Nov 2008

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How do bacteria find their way to the food ? many biological systems use the chemo-taxis algorithm to improve their conditions and hence, their chance to survive. Chemo-taxis in general refers to movement influenced by chemical properties of the medium. In this model, we have a group of independent cells in 2-dimensions. Each cell moves in a straight line in random orientation until it tumbles. When it tumbles, the cell gets a new and random direction for propagation, independent of the past. Tumbles occur in some rate of events per unit time. The cell can regulate its tumbling-rate. Furthermore, the cell can detect and remeber local food concentartion. The chemo-taxis algorithm is as follows: If the cell detects a positive change in food concentartion (the cell is happy) - it lowers the tumbling-rate (less tumbles per second, movement in longer straight lines). If the cell detects a negative change in food concentration (the cell is sad) - it raises the tumbling-rate. If the cell detects no change in food concentration - the tumbling rate returns to some default, normal value of tumbling-rate (this is the adaptation mechanism).
http://www.weizmann.ac.il/mcb/UriAlon/

Cite As

Shmuel Ben-Ezra (2024). Taxi - movement of bacteria to the food (https://www.mathworks.com/matlabcentral/fileexchange/9732-taxi-movement-of-bacteria-to-the-food), MATLAB Central File Exchange. Retrieved .

MATLAB Release Compatibility
Created with R14SP3
Compatible with any release
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Version Published Release Notes
1.1.0.0

Graphically enhanced to provide the user with better control and to display the evolution of the system over time.

1.0.0.0

Help menu added, describing theory, algoeithm and usage of application.