I am really glad someone has found this useful! I have used Sphinx with the matlabdomain extension to document several of my MATLAB projects at work, and IMO the documentation it produces is very nice. BTW: It can be installed using either `pip` or `easy_install`, EG: `pip install sphinxcontrib-matlabdomain`. You must have Sphinx (and Python) to use the extension.
https://pypi.python.org/pypi/sphinxcontrib-matlabdomain http://www.python.org/getit/ http://sphinx-doc.org/ FYI: the latest version allows autodocumentation using your H1 comment line (aka docstring) and comments after properties. I recommend using the Napoleon extension for docstrings, which will become part of Sphinx-1.3.
(Disclaimer: I am the developer of sphinxcontrib-matlabdomain.)
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