Community Profile

Dr. Soumya Banerjee

Harvard University

Last seen: 10 months ago | Active since 2011

https://sites.google.com/site/neelsoumya/ Professional Interests: Biocomputing, machine learning, bioinformatics, complex systems, mathematical modelling, big data, computational biology, biologically inspired computing, complex systems

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Submitted

Samples from gamma and Wishart
Test and draw samples from a gamma distribution and a Wishart distribution

5 years ago | 1 download |

Submitted

Generic function to perform logistic regression using elastic net regularization
Generic function to perform logistic regression using elastic net regularization

6 years ago | 1 download |

Submitted

Example MATLAB script to plot ROC curve for different classification algorithms
Example MATLAB script to plot ROC curve and compute AUC for 4 different classification algorithms

6 years ago | 4 downloads |

Submitted

A generic function that uses a Generalized Linear Model (GLM) with factors
A generic function that uses a Generalized Linear Model (GLM) with factors

6 years ago | 1 download |

Submitted

Function to compute Fisher's p-value for meta-analysis
Function to compute Fisher's p-value for meta-analysis.

6 years ago | 5 downloads |

Submitted

Generic function and example code for using neural networks
Generic function and example code for using neural networks for prediction.

6 years ago | 3 downloads |

Submitted

Generic example code and generic function for random forests
example code and generic function for random forests (checks out of bag errors and leaf size)

7 years ago | 4 downloads |

Submitted

Simple example and generic function for SVM binary classifier for general matrix
Simple generic function that takes two labelled classes and trains SVM classifier (general matrix).

7 years ago | 1 download |

Submitted

Simple example and generic function for SVM binary classifier
Simple generic function that takes two labelled classes and trains SVM classifier.

7 years ago | 2 downloads |

Submitted

Simple example code and generic function for random forests
Simple example code and generic function for random forests (checks out of bag errors)

7 years ago | 19 downloads |

Submitted

Function to plot co-ordinates from a file on a map
Code to load co-ordinate data from a file and call function to plot co-ordinates on a map.

8 years ago | 1 download |

Submitted

Generic function and example code for performing LASSO on GLM
Generic function and example code for performing LASSO on GLM and using it for prediction

8 years ago | 1 download |

Submitted

Generic function for LASSO on logistic regression
Generic function and example code for LASSO on logistic regression.

8 years ago | 4 downloads |

Submitted

Simple example and generic function to perform PCA
Simple example and generic function to perform PCA(principle components analysis)

9 years ago | 2 downloads |

Submitted

Example code and generic function to perform LASSO on GLM
Generic function to perform LASSO on generalized linear model (GLM).

9 years ago | 1 download |

Submitted

Function to perform Bayesian LASSO
Function to perform Bayesian LASSO (least absolute shrinkage and selection operator)

9 years ago | 1 download |

Submitted

Simple MATLAB example code and generic function to perform LASSO
Simple MATLAB example code and generic function to perform LASSO

9 years ago | 3 downloads |

Submitted

Bash script to compile MATLAB code in each directory
Iterative matlab compiler: this has Bash scripts to compile MATLAB code in each directory

9 years ago | 1 download |

Submitted

Scripts to run MATLAB on cluster using bsub
This is a set of scripts to run MATLAB in batch mode on the cluster using bsub

9 years ago | 1 download |

Submitted

Simple example and generic function for kmeans clustering
Simple generic function and example to perform kmeans clustering

9 years ago | 1 download |

Submitted

Bayesian Linear Regression
This is a set of MATLAB functions to do Bayesian linear regression

9 years ago | 7 downloads |

Submitted

Graphical User Interface for Solving Ordinary Differential Equations for In-Vitro Infection
A graphical user interface to solve a set of ordinary differential equations (in-vitro infection)

9 years ago | 1 download |

Submitted

Wilcoxon rank-sum test and box plots for genes/compounds etc in healthy vs. disease
Does a Wilcoxon rank-sum test and creates box plot for genes etc in healthy vs. disease individuals

9 years ago | 5 downloads |

Submitted

t-test and box plots for genes/compounds etc in healthy vs. disease
Does a t-test and creates box plots for genes/compounds in healthy vs. disease individuals

9 years ago | 1 download |

Submitted

healthy_disease_boxplot.zip
Box plots of measured quantity in healthy vs. disease in two cohorts

9 years ago | 1 download |

Submitted

Linear regression for multiple category data with different slopes for each
The function does OLS and RMA regression on data that is categorized into two different categories

10 years ago | 2 downloads |

Submitted

Linear regression with statistics for multiple category data
This function does linear regression with statistics for multiple category data (OLS and RMA)

11 years ago | 1 download |

Submitted

A Graphical User Interface for Solving Delay Differential Equations and doing Local Search
A GUI for solving a set of delay differential equations (DDEs) and local search for best solutions

12 years ago | 1 download |

Submitted

Graphical User Interface for Solving Ordinary Differential Equations
A Graphical User Interface for Solving Ordinary Differential Equations (Immune Response Model)

12 years ago | 1 download |

Submitted

Linear regression on log transformed data
A function that takes two column vectors and does linear regression on the data

12 years ago | 2 downloads |