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SPM NeuroSynth scraper

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SPM NeuroSynth scraper

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12 Nov 2012 (Updated )

Scrape activation information from NeuroSynth.org for SPM8 first- or second-level results.

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Description

Lookup voxel activations with the neurosynth.org database

REQUIRED: SPM(only tested on 8) must be installed.
You can use this script in two ways:
1) Pass a filename of an analyze-format statmap, or
2) Estimate an SPM model and load it into the workspace with the "Results" button (in order to produce an xSPM structure)

The script will then scrape neurosynth.org for anatomical information associated with your activations.

%example 1A:
spm_mongo_neurosynth(xSPM); %loaded via the spm 8 results interface
%example 1B:
spm_mongo_neurosynth('my_statmap.hdr'); %note that img/nii also work
%example 2:
spm_mongo_neurosynth(xSPM,'savedata');
%example 3:
spm_mongo_neurosynth(xSPM,'savedata','search',1);

Acknowledgements

Cell2csv inspired this file.

Required Products MATLAB
MATLAB release MATLAB 7.9 (R2009b)
Other requirements SPM8, internet connection
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Updates
12 Nov 2012

Reformatted help section

19 Nov 2012

Added a routine to find data in the vicinity of coordinates that are not in the NeuroSynth database.

30 Nov 2012

Fixed varargin error

03 Dec 2012

bug fix

21 Jan 2013

Added a "searchlight" routine for finding information about activations.

22 Jan 2013

now accepts filenames of analyze-format statmaps

11 Jul 2013

More bug fixes

09 Aug 2013

Bug Fix

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